Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CCDC168Q8NDH2 HEIH-201ENST00000623091 1652 ntBASIC15.21■□□□□ 0.03
CCDC168Q8NDH2 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC168Q8NDH2 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CCDC168Q8NDH2 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CCDC168Q8NDH2 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC168Q8NDH2 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC168Q8NDH2 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC168Q8NDH2 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC168Q8NDH2 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CCDC168Q8NDH2 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC168Q8NDH2 HLA-V-201ENST00000429037 534 ntBASIC15.21■□□□□ 0.03
CCDC168Q8NDH2 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.21■□□□□ 0.03
CCDC168Q8NDH2 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC168Q8NDH2 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.21■□□□□ 0.03
CCDC168Q8NDH2 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC168Q8NDH2 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.21■□□□□ 0.03
CCDC168Q8NDH2 MIR4745-201ENST00000577608 62 ntBASIC15.21■□□□□ 0.03
CCDC168Q8NDH2 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC168Q8NDH2 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC168Q8NDH2 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC168Q8NDH2 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC168Q8NDH2 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC168Q8NDH2 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC168Q8NDH2 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC168Q8NDH2 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC168Q8NDH2 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC168Q8NDH2 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC168Q8NDH2 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC15.21■□□□□ 0.03
CCDC168Q8NDH2 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC168Q8NDH2 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.21■□□□□ 0.03
CCDC168Q8NDH2 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCDC168Q8NDH2 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.21■□□□□ 0.02
CCDC168Q8NDH2 CEND1P1-201ENST00000451006 455 ntBASIC15.21■□□□□ 0.02
CCDC168Q8NDH2 AC093214.1-201ENST00000511688 1107 ntBASIC15.21■□□□□ 0.02
CCDC168Q8NDH2 AC004449.1-201ENST00000564240 433 ntBASIC15.21■□□□□ 0.02
CCDC168Q8NDH2 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.21■□□□□ 0.02
CCDC168Q8NDH2 KRT8P32-201ENST00000512863 1461 ntBASIC15.21■□□□□ 0.02
CCDC168Q8NDH2 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC15.21■□□□□ 0.02
CCDC168Q8NDH2 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC168Q8NDH2 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC15.2■□□□□ 0.02
CCDC168Q8NDH2 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CCDC168Q8NDH2 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CCDC168Q8NDH2 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC15.2■□□□□ 0.02
CCDC168Q8NDH2 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC168Q8NDH2 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC168Q8NDH2 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC168Q8NDH2 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.2■□□□□ 0.02
CCDC168Q8NDH2 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.2■□□□□ 0.02
CCDC168Q8NDH2 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC168Q8NDH2 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.2■□□□□ 0.02
CCDC168Q8NDH2 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.2■□□□□ 0.02
CCDC168Q8NDH2 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC168Q8NDH2 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC168Q8NDH2 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CCDC168Q8NDH2 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC168Q8NDH2 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC168Q8NDH2 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC168Q8NDH2 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.2■□□□□ 0.02
CCDC168Q8NDH2 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.2■□□□□ 0.02
CCDC168Q8NDH2 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC168Q8NDH2 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC168Q8NDH2 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CCDC168Q8NDH2 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC168Q8NDH2 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.2■□□□□ 0.02
CCDC168Q8NDH2 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC168Q8NDH2 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.2■□□□□ 0.02
CCDC168Q8NDH2 AC064836.3-201ENST00000607928 673 ntBASIC15.2■□□□□ 0.02
CCDC168Q8NDH2 AL008721.1-201ENST00000609964 604 ntBASIC15.2■□□□□ 0.02
CCDC168Q8NDH2 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC168Q8NDH2 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CCDC168Q8NDH2 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.2■□□□□ 0.02
CCDC168Q8NDH2 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC15.19■□□□□ 0.02
CCDC168Q8NDH2 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
CCDC168Q8NDH2 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC15.19■□□□□ 0.02
CCDC168Q8NDH2 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC168Q8NDH2 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC168Q8NDH2 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.19■□□□□ 0.02
CCDC168Q8NDH2 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.19■□□□□ 0.02
CCDC168Q8NDH2 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.19■□□□□ 0.02
CCDC168Q8NDH2 GAPDHP21-201ENST00000450301 1010 ntBASIC15.19■□□□□ 0.02
CCDC168Q8NDH2 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.19■□□□□ 0.02
CCDC168Q8NDH2 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC15.19■□□□□ 0.02
CCDC168Q8NDH2 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.19■□□□□ 0.02
CCDC168Q8NDH2 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.19■□□□□ 0.02
CCDC168Q8NDH2 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC168Q8NDH2 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC168Q8NDH2 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC168Q8NDH2 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC168Q8NDH2 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CCDC168Q8NDH2 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CCDC168Q8NDH2 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC168Q8NDH2 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC168Q8NDH2 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CCDC168Q8NDH2 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC15.19■□□□□ 0.02
CCDC168Q8NDH2 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC168Q8NDH2 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.19■□□□□ 0.02
CCDC168Q8NDH2 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC168Q8NDH2 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC168Q8NDH2 KRT18P41-201ENST00000518924 1277 ntBASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms