Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cystm1Q8K353 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cystm1Q8K353 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cystm1Q8K353 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cystm1Q8K353 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Cystm1Q8K353 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cystm1Q8K353 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cystm1Q8K353 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cystm1Q8K353 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cystm1Q8K353 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Cystm1Q8K353 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cystm1Q8K353 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Cystm1Q8K353 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC9.69□□□□□ -0.86
Cystm1Q8K353 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC9.69□□□□□ -0.86
Cystm1Q8K353 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cystm1Q8K353 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Cystm1Q8K353 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cystm1Q8K353 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC9.69□□□□□ -0.86
Cystm1Q8K353 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Cystm1Q8K353 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Cystm1Q8K353 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Cystm1Q8K353 Gm17661-201ENSMUST00000170317 270 ntBASIC9.69□□□□□ -0.86
Cystm1Q8K353 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Cystm1Q8K353 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC9.69□□□□□ -0.86
Cystm1Q8K353 Mir1668-201ENSMUST00000184114 107 ntBASIC9.69□□□□□ -0.86
Cystm1Q8K353 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Cystm1Q8K353 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cystm1Q8K353 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC9.69□□□□□ -0.86
Cystm1Q8K353 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Cystm1Q8K353 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Cystm1Q8K353 AC153366.2-201ENSMUST00000219461 1984 ntBASIC9.69□□□□□ -0.86
Cystm1Q8K353 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Cystm1Q8K353 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cystm1Q8K353 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cystm1Q8K353 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cystm1Q8K353 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Cystm1Q8K353 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Cystm1Q8K353 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Cystm1Q8K353 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Cystm1Q8K353 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cystm1Q8K353 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Cystm1Q8K353 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cystm1Q8K353 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Cystm1Q8K353 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cystm1Q8K353 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cystm1Q8K353 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC9.69□□□□□ -0.86
Cystm1Q8K353 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cystm1Q8K353 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Cystm1Q8K353 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Cystm1Q8K353 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Cystm1Q8K353 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cystm1Q8K353 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cystm1Q8K353 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cystm1Q8K353 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Cystm1Q8K353 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cystm1Q8K353 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Cystm1Q8K353 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cystm1Q8K353 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Cystm1Q8K353 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Cystm1Q8K353 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cystm1Q8K353 Camk2g-217ENSMUST00000226630 1937 ntBASIC9.68□□□□□ -0.86
Cystm1Q8K353 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cystm1Q8K353 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Cystm1Q8K353 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cystm1Q8K353 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cystm1Q8K353 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC9.68□□□□□ -0.86
Cystm1Q8K353 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cystm1Q8K353 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cystm1Q8K353 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC9.68□□□□□ -0.86
Cystm1Q8K353 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Cystm1Q8K353 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cystm1Q8K353 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Cystm1Q8K353 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cystm1Q8K353 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Cystm1Q8K353 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cystm1Q8K353 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cystm1Q8K353 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC9.68□□□□□ -0.86
Cystm1Q8K353 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cystm1Q8K353 Gm9856-201ENSMUST00000217077 2578 ntBASIC9.68□□□□□ -0.86
Cystm1Q8K353 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Cystm1Q8K353 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC9.68□□□□□ -0.86
Cystm1Q8K353 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Cystm1Q8K353 AA414768-201ENSMUST00000121924 1257 ntBASIC9.68□□□□□ -0.86
Cystm1Q8K353 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cystm1Q8K353 Gm23634-201ENSMUST00000175071 91 ntBASIC9.68□□□□□ -0.86
Cystm1Q8K353 Gm22697-201ENSMUST00000175194 63 ntBASIC9.68□□□□□ -0.86
Cystm1Q8K353 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cystm1Q8K353 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC9.68□□□□□ -0.86
Cystm1Q8K353 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC9.68□□□□□ -0.86
Cystm1Q8K353 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Cystm1Q8K353 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cystm1Q8K353 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC9.68□□□□□ -0.86
Cystm1Q8K353 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cystm1Q8K353 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cystm1Q8K353 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cystm1Q8K353 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cystm1Q8K353 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cystm1Q8K353 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Cystm1Q8K353 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cystm1Q8K353 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms