Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CroccQ8CJ40 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CroccQ8CJ40 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CroccQ8CJ40 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CroccQ8CJ40 Gm2651-201ENSMUST00000203560 838 ntBASIC14.71□□□□□ -0.05
CroccQ8CJ40 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.71□□□□□ -0.05
CroccQ8CJ40 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
CroccQ8CJ40 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CroccQ8CJ40 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CroccQ8CJ40 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CroccQ8CJ40 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CroccQ8CJ40 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CroccQ8CJ40 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
CroccQ8CJ40 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CroccQ8CJ40 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.71□□□□□ -0.05
CroccQ8CJ40 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CroccQ8CJ40 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.71□□□□□ -0.05
CroccQ8CJ40 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CroccQ8CJ40 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.71□□□□□ -0.05
CroccQ8CJ40 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CroccQ8CJ40 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CroccQ8CJ40 Gm15173-201ENSMUST00000122049 433 ntBASIC14.71□□□□□ -0.05
CroccQ8CJ40 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.71□□□□□ -0.05
CroccQ8CJ40 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
CroccQ8CJ40 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
CroccQ8CJ40 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
CroccQ8CJ40 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.7□□□□□ -0.06
CroccQ8CJ40 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CroccQ8CJ40 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CroccQ8CJ40 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CroccQ8CJ40 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CroccQ8CJ40 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CroccQ8CJ40 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CroccQ8CJ40 Gm27741-201ENSMUST00000185060 237 ntBASIC14.7□□□□□ -0.06
CroccQ8CJ40 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.7□□□□□ -0.06
CroccQ8CJ40 Gm9682-201ENSMUST00000197505 556 ntBASIC14.7□□□□□ -0.06
CroccQ8CJ40 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.7□□□□□ -0.06
CroccQ8CJ40 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CroccQ8CJ40 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CroccQ8CJ40 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CroccQ8CJ40 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CroccQ8CJ40 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CroccQ8CJ40 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CroccQ8CJ40 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CroccQ8CJ40 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CroccQ8CJ40 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CroccQ8CJ40 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CroccQ8CJ40 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CroccQ8CJ40 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CroccQ8CJ40 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CroccQ8CJ40 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CroccQ8CJ40 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CroccQ8CJ40 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CroccQ8CJ40 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.7□□□□□ -0.06
CroccQ8CJ40 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CroccQ8CJ40 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.7□□□□□ -0.06
CroccQ8CJ40 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.7□□□□□ -0.06
CroccQ8CJ40 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.7□□□□□ -0.06
CroccQ8CJ40 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.7□□□□□ -0.06
CroccQ8CJ40 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CroccQ8CJ40 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CroccQ8CJ40 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CroccQ8CJ40 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CroccQ8CJ40 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CroccQ8CJ40 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CroccQ8CJ40 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CroccQ8CJ40 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CroccQ8CJ40 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CroccQ8CJ40 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CroccQ8CJ40 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CroccQ8CJ40 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CroccQ8CJ40 Gm5864-201ENSMUST00000202263 970 ntBASIC14.69□□□□□ -0.06
CroccQ8CJ40 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CroccQ8CJ40 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CroccQ8CJ40 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CroccQ8CJ40 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CroccQ8CJ40 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CroccQ8CJ40 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
CroccQ8CJ40 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CroccQ8CJ40 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CroccQ8CJ40 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
CroccQ8CJ40 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CroccQ8CJ40 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
CroccQ8CJ40 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CroccQ8CJ40 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CroccQ8CJ40 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CroccQ8CJ40 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CroccQ8CJ40 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CroccQ8CJ40 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CroccQ8CJ40 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CroccQ8CJ40 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.68□□□□□ -0.06
CroccQ8CJ40 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.68□□□□□ -0.06
CroccQ8CJ40 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.68□□□□□ -0.06
CroccQ8CJ40 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CroccQ8CJ40 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
CroccQ8CJ40 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CroccQ8CJ40 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CroccQ8CJ40 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CroccQ8CJ40 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CroccQ8CJ40 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms