Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Sox17Q61473 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Sox17Q61473 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox17Q61473 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Sox17Q61473 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.47□□□□□ -0.09
Sox17Q61473 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.47□□□□□ -0.09
Sox17Q61473 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.47□□□□□ -0.09
Sox17Q61473 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox17Q61473 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sox17Q61473 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.47□□□□□ -0.09
Sox17Q61473 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sox17Q61473 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox17Q61473 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox17Q61473 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox17Q61473 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox17Q61473 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox17Q61473 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox17Q61473 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox17Q61473 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.47□□□□□ -0.09
Sox17Q61473 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sox17Q61473 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox17Q61473 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Sox17Q61473 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox17Q61473 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Sox17Q61473 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Sox17Q61473 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox17Q61473 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox17Q61473 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sox17Q61473 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Sox17Q61473 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox17Q61473 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox17Q61473 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Sox17Q61473 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.46□□□□□ -0.09
Sox17Q61473 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC14.46□□□□□ -0.09
Sox17Q61473 Gm27011-201ENSMUST00000182352 972 ntBASIC14.46□□□□□ -0.09
Sox17Q61473 Gm37722-201ENSMUST00000193757 208 ntBASIC14.46□□□□□ -0.09
Sox17Q61473 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Sox17Q61473 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox17Q61473 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Sox17Q61473 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Sox17Q61473 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
Sox17Q61473 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.45□□□□□ -0.1
Sox17Q61473 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sox17Q61473 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sox17Q61473 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.45□□□□□ -0.1
Sox17Q61473 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox17Q61473 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Sox17Q61473 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox17Q61473 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox17Q61473 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.45□□□□□ -0.1
Sox17Q61473 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox17Q61473 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox17Q61473 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox17Q61473 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Sox17Q61473 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox17Q61473 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC14.45□□□□□ -0.1
Sox17Q61473 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox17Q61473 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox17Q61473 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox17Q61473 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox17Q61473 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox17Q61473 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox17Q61473 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Sox17Q61473 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Sox17Q61473 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox17Q61473 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sox17Q61473 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox17Q61473 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sox17Q61473 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox17Q61473 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.45□□□□□ -0.1
Sox17Q61473 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox17Q61473 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox17Q61473 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox17Q61473 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Sox17Q61473 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox17Q61473 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Sox17Q61473 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox17Q61473 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox17Q61473 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Sox17Q61473 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.44□□□□□ -0.1
Sox17Q61473 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox17Q61473 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sox17Q61473 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox17Q61473 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.44□□□□□ -0.1
Sox17Q61473 Gm8520-201ENSMUST00000186517 868 ntBASIC14.44□□□□□ -0.1
Sox17Q61473 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.44□□□□□ -0.1
Sox17Q61473 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.44□□□□□ -0.1
Sox17Q61473 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox17Q61473 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Sox17Q61473 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox17Q61473 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox17Q61473 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox17Q61473 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.44□□□□□ -0.1
Sox17Q61473 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox17Q61473 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox17Q61473 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox17Q61473 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox17Q61473 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox17Q61473 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox17Q61473 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms