Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Gm26571-201ENSMUST00000181399 666 ntBASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7d-4Q5R1H9 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7d-4Q5R1H9 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7d-4Q5R1H9 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7d-4Q5R1H9 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7d-4Q5R1H9 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7d-4Q5R1H9 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7d-4Q5R1H9 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7d-4Q5R1H9 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7d-4Q5R1H9 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7d-4Q5R1H9 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7d-4Q5R1H9 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7d-4Q5R1H9 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav7d-4Q5R1H9 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7d-4Q5R1H9 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7d-4Q5R1H9 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7d-4Q5R1H9 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7d-4Q5R1H9 Gm29707-201ENSMUST00000196325 491 ntBASIC11.75□□□□□ -0.53
Trav7d-4Q5R1H9 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Trav7d-4Q5R1H9 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7d-4Q5R1H9 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7d-4Q5R1H9 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7d-4Q5R1H9 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7d-4Q5R1H9 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7d-4Q5R1H9 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7d-4Q5R1H9 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7d-4Q5R1H9 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav7d-4Q5R1H9 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7d-4Q5R1H9 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav7d-4Q5R1H9 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7d-4Q5R1H9 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7d-4Q5R1H9 Gm37019-201ENSMUST00000192133 2134 ntBASIC11.75□□□□□ -0.53
Trav7d-4Q5R1H9 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav7d-4Q5R1H9 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7d-4Q5R1H9 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7d-4Q5R1H9 Gm5049-201ENSMUST00000195878 1590 ntBASIC11.75□□□□□ -0.53
Trav7d-4Q5R1H9 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7d-4Q5R1H9 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7d-4Q5R1H9 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trav7d-4Q5R1H9 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7d-4Q5R1H9 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav7d-4Q5R1H9 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav7d-4Q5R1H9 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav7d-4Q5R1H9 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav7d-4Q5R1H9 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav7d-4Q5R1H9 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Trav7d-4Q5R1H9 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav7d-4Q5R1H9 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav7d-4Q5R1H9 Gm43205-201ENSMUST00000198622 1968 ntBASIC11.74□□□□□ -0.53
Trav7d-4Q5R1H9 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav7d-4Q5R1H9 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav7d-4Q5R1H9 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav7d-4Q5R1H9 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav7d-4Q5R1H9 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trav7d-4Q5R1H9 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav7d-4Q5R1H9 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav7d-4Q5R1H9 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav7d-4Q5R1H9 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trav7d-4Q5R1H9 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav7d-4Q5R1H9 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms