Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cks1brtQ3UNC9 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cks1brtQ3UNC9 Gm12134-201ENSMUST00000122109 520 ntBASIC11.12□□□□□ -0.63
Cks1brtQ3UNC9 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC11.12□□□□□ -0.63
Cks1brtQ3UNC9 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC11.12□□□□□ -0.63
Cks1brtQ3UNC9 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cks1brtQ3UNC9 Gm6365-201ENSMUST00000054711 744 ntBASIC11.12□□□□□ -0.63
Cks1brtQ3UNC9 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cks1brtQ3UNC9 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cks1brtQ3UNC9 Gm38327-201ENSMUST00000195852 1755 ntBASIC11.12□□□□□ -0.63
Cks1brtQ3UNC9 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cks1brtQ3UNC9 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cks1brtQ3UNC9 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cks1brtQ3UNC9 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC11.12□□□□□ -0.63
Cks1brtQ3UNC9 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cks1brtQ3UNC9 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cks1brtQ3UNC9 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cks1brtQ3UNC9 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC11.12□□□□□ -0.63
Cks1brtQ3UNC9 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cks1brtQ3UNC9 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cks1brtQ3UNC9 Gm45560-201ENSMUST00000211492 1472 ntBASIC11.12□□□□□ -0.63
Cks1brtQ3UNC9 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cks1brtQ3UNC9 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cks1brtQ3UNC9 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cks1brtQ3UNC9 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cks1brtQ3UNC9 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Cks1brtQ3UNC9 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Cks1brtQ3UNC9 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cks1brtQ3UNC9 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cks1brtQ3UNC9 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cks1brtQ3UNC9 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cks1brtQ3UNC9 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cks1brtQ3UNC9 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cks1brtQ3UNC9 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cks1brtQ3UNC9 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cks1brtQ3UNC9 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cks1brtQ3UNC9 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cks1brtQ3UNC9 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cks1brtQ3UNC9 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cks1brtQ3UNC9 Gm24841-201ENSMUST00000158676 357 ntBASIC11.11□□□□□ -0.63
Cks1brtQ3UNC9 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cks1brtQ3UNC9 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cks1brtQ3UNC9 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cks1brtQ3UNC9 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cks1brtQ3UNC9 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cks1brtQ3UNC9 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cks1brtQ3UNC9 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cks1brtQ3UNC9 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC11.11□□□□□ -0.63
Cks1brtQ3UNC9 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cks1brtQ3UNC9 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Cks1brtQ3UNC9 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cks1brtQ3UNC9 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Cks1brtQ3UNC9 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Cks1brtQ3UNC9 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cks1brtQ3UNC9 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Cks1brtQ3UNC9 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cks1brtQ3UNC9 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cks1brtQ3UNC9 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cks1brtQ3UNC9 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.11□□□□□ -0.63
Cks1brtQ3UNC9 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1brtQ3UNC9 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.1□□□□□ -0.63
Cks1brtQ3UNC9 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cks1brtQ3UNC9 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cks1brtQ3UNC9 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC11.1□□□□□ -0.63
Cks1brtQ3UNC9 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1brtQ3UNC9 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1brtQ3UNC9 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1brtQ3UNC9 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1brtQ3UNC9 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1brtQ3UNC9 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1brtQ3UNC9 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1brtQ3UNC9 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Cks1brtQ3UNC9 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Cks1brtQ3UNC9 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1brtQ3UNC9 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC11.1□□□□□ -0.63
Cks1brtQ3UNC9 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1brtQ3UNC9 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1brtQ3UNC9 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1brtQ3UNC9 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1brtQ3UNC9 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1brtQ3UNC9 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1brtQ3UNC9 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC11.1□□□□□ -0.63
Cks1brtQ3UNC9 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1brtQ3UNC9 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1brtQ3UNC9 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1brtQ3UNC9 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1brtQ3UNC9 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1brtQ3UNC9 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1brtQ3UNC9 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC11.1□□□□□ -0.63
Cks1brtQ3UNC9 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1brtQ3UNC9 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Cks1brtQ3UNC9 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1brtQ3UNC9 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC11.1□□□□□ -0.63
Cks1brtQ3UNC9 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1brtQ3UNC9 Gm43399-201ENSMUST00000202546 2374 ntBASIC11.1□□□□□ -0.63
Cks1brtQ3UNC9 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1brtQ3UNC9 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Cks1brtQ3UNC9 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC11.09□□□□□ -0.63
Cks1brtQ3UNC9 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1brtQ3UNC9 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms