Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msx2Q03358 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Msx2Q03358 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msx2Q03358 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msx2Q03358 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
Msx2Q03358 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msx2Q03358 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.97□□□□□ -0.01
Msx2Q03358 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msx2Q03358 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Msx2Q03358 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.97□□□□□ -0.01
Msx2Q03358 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msx2Q03358 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msx2Q03358 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msx2Q03358 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msx2Q03358 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.97□□□□□ -0.01
Msx2Q03358 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msx2Q03358 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Msx2Q03358 Gm10052-201ENSMUST00000168019 960 ntBASIC14.97□□□□□ -0.01
Msx2Q03358 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.97□□□□□ -0.01
Msx2Q03358 Gm44430-201ENSMUST00000203376 995 ntBASIC14.97□□□□□ -0.01
Msx2Q03358 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.97□□□□□ -0.01
Msx2Q03358 Gm7729-201ENSMUST00000050143 801 ntBASIC14.97□□□□□ -0.01
Msx2Q03358 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msx2Q03358 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msx2Q03358 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
Msx2Q03358 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msx2Q03358 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msx2Q03358 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Msx2Q03358 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msx2Q03358 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msx2Q03358 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msx2Q03358 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Msx2Q03358 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msx2Q03358 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Msx2Q03358 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msx2Q03358 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msx2Q03358 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msx2Q03358 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msx2Q03358 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msx2Q03358 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msx2Q03358 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msx2Q03358 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msx2Q03358 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msx2Q03358 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msx2Q03358 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msx2Q03358 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msx2Q03358 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Msx2Q03358 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msx2Q03358 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msx2Q03358 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Msx2Q03358 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.96□□□□□ -0.01
Msx2Q03358 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Msx2Q03358 Gm37722-201ENSMUST00000193757 208 ntBASIC14.96□□□□□ -0.01
Msx2Q03358 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.96□□□□□ -0.01
Msx2Q03358 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.96□□□□□ -0.01
Msx2Q03358 Grk6-207ENSMUST00000225925 2769 ntBASIC14.96□□□□□ -0.01
Msx2Q03358 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msx2Q03358 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msx2Q03358 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msx2Q03358 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msx2Q03358 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msx2Q03358 Gm10812-201ENSMUST00000099864 546 ntBASIC14.96□□□□□ -0.01
Msx2Q03358 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.96□□□□□ -0.01
Msx2Q03358 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msx2Q03358 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msx2Q03358 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Msx2Q03358 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Msx2Q03358 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msx2Q03358 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Msx2Q03358 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.96□□□□□ -0.02
Msx2Q03358 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Msx2Q03358 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Msx2Q03358 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Msx2Q03358 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Msx2Q03358 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Msx2Q03358 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Msx2Q03358 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Msx2Q03358 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Msx2Q03358 Gm13559-201ENSMUST00000120476 863 ntBASIC14.95□□□□□ -0.02
Msx2Q03358 Gm6257-201ENSMUST00000163864 910 ntBASIC14.95□□□□□ -0.02
Msx2Q03358 Mir5130-201ENSMUST00000175160 84 ntBASIC14.95□□□□□ -0.02
Msx2Q03358 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.95□□□□□ -0.02
Msx2Q03358 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Msx2Q03358 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.95□□□□□ -0.02
Msx2Q03358 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Msx2Q03358 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Msx2Q03358 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Msx2Q03358 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.95□□□□□ -0.02
Msx2Q03358 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Msx2Q03358 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Msx2Q03358 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Msx2Q03358 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Msx2Q03358 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Msx2Q03358 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Msx2Q03358 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Msx2Q03358 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Msx2Q03358 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Msx2Q03358 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Msx2Q03358 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Msx2Q03358 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms