Protein–RNA interactions for Protein: Q01149

Col1a2, Collagen alpha-2(I) chain, mousemouse

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2Q01149 Gm6018-201ENSMUST00000216090 1306 ntBASIC19.17■□□□□ 0.66
Col1a2Q01149 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC19.17■□□□□ 0.66
Col1a2Q01149 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col1a2Q01149 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Col1a2Q01149 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col1a2Q01149 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col1a2Q01149 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Col1a2Q01149 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC19.16■□□□□ 0.66
Col1a2Q01149 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col1a2Q01149 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Col1a2Q01149 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Col1a2Q01149 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col1a2Q01149 Gm10576-201ENSMUST00000191927 825 ntBASIC19.16■□□□□ 0.66
Col1a2Q01149 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col1a2Q01149 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Col1a2Q01149 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC19.16■□□□□ 0.66
Col1a2Q01149 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col1a2Q01149 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col1a2Q01149 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col1a2Q01149 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Col1a2Q01149 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col1a2Q01149 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col1a2Q01149 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC19.15■□□□□ 0.66
Col1a2Q01149 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col1a2Q01149 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col1a2Q01149 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col1a2Q01149 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col1a2Q01149 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col1a2Q01149 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col1a2Q01149 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col1a2Q01149 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Col1a2Q01149 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col1a2Q01149 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col1a2Q01149 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col1a2Q01149 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col1a2Q01149 Celf4-206ENSMUST00000224553 1729 ntBASIC19.15■□□□□ 0.66
Col1a2Q01149 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Col1a2Q01149 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col1a2Q01149 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Col1a2Q01149 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col1a2Q01149 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Col1a2Q01149 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col1a2Q01149 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Col1a2Q01149 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Col1a2Q01149 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC19.15■□□□□ 0.66
Col1a2Q01149 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC19.15■□□□□ 0.66
Col1a2Q01149 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col1a2Q01149 AC159114.1-201ENSMUST00000220349 266 ntBASIC19.15■□□□□ 0.66
Col1a2Q01149 AC140397.2-201ENSMUST00000224213 834 ntBASIC19.15■□□□□ 0.66
Col1a2Q01149 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC19.15■□□□□ 0.66
Col1a2Q01149 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col1a2Q01149 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Col1a2Q01149 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col1a2Q01149 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col1a2Q01149 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Col1a2Q01149 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Col1a2Q01149 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col1a2Q01149 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC19.14■□□□□ 0.65
Col1a2Q01149 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Col1a2Q01149 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col1a2Q01149 Gm43767-201ENSMUST00000198933 381 ntBASIC19.14■□□□□ 0.65
Col1a2Q01149 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Col1a2Q01149 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Col1a2Q01149 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col1a2Q01149 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col1a2Q01149 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Col1a2Q01149 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col1a2Q01149 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col1a2Q01149 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col1a2Q01149 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Col1a2Q01149 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Col1a2Q01149 Gm8597-201ENSMUST00000191525 1109 ntBASIC19.13■□□□□ 0.65
Col1a2Q01149 Gm44872-201ENSMUST00000207864 420 ntBASIC19.13■□□□□ 0.65
Col1a2Q01149 AC131710.1-201ENSMUST00000228336 990 ntBASIC19.13■□□□□ 0.65
Col1a2Q01149 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Col1a2Q01149 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col1a2Q01149 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col1a2Q01149 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col1a2Q01149 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col1a2Q01149 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC19.12■□□□□ 0.65
Col1a2Q01149 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC19.12■□□□□ 0.65
Col1a2Q01149 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col1a2Q01149 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Col1a2Q01149 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Col1a2Q01149 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.12■□□□□ 0.65
Col1a2Q01149 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col1a2Q01149 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Col1a2Q01149 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Col1a2Q01149 Mir449b-201ENSMUST00000104833 80 ntBASIC19.12■□□□□ 0.65
Col1a2Q01149 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col1a2Q01149 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC19.12■□□□□ 0.65
Col1a2Q01149 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC19.12■□□□□ 0.65
Col1a2Q01149 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC19.12■□□□□ 0.65
Col1a2Q01149 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC19.12■□□□□ 0.65
Col1a2Q01149 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Col1a2Q01149 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC19.12■□□□□ 0.65
Col1a2Q01149 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC19.12■□□□□ 0.65
Col1a2Q01149 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC19.12■□□□□ 0.65
Col1a2Q01149 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Col1a2Q01149 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms