Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.82■□□□□ 0.28
Sox5P35710 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox5P35710 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox5P35710 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox5P35710 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sox5P35710 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox5P35710 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox5P35710 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox5P35710 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Sox5P35710 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox5P35710 Grk6-207ENSMUST00000225925 2769 ntBASIC16.81■□□□□ 0.28
Sox5P35710 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox5P35710 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Sox5P35710 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox5P35710 Rprl3-201ENSMUST00000157400 290 ntBASIC16.81■□□□□ 0.28
Sox5P35710 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.81■□□□□ 0.28
Sox5P35710 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox5P35710 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox5P35710 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox5P35710 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sox5P35710 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox5P35710 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox5P35710 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox5P35710 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox5P35710 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox5P35710 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox5P35710 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Sox5P35710 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox5P35710 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox5P35710 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox5P35710 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.81■□□□□ 0.28
Sox5P35710 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox5P35710 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox5P35710 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Sox5P35710 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox5P35710 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox5P35710 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox5P35710 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox5P35710 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.8■□□□□ 0.28
Sox5P35710 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Sox5P35710 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox5P35710 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Sox5P35710 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sox5P35710 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Sox5P35710 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox5P35710 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Sox5P35710 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Sox5P35710 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox5P35710 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Sox5P35710 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.8■□□□□ 0.28
Sox5P35710 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sox5P35710 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox5P35710 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.8■□□□□ 0.28
Sox5P35710 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox5P35710 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.8■□□□□ 0.28
Sox5P35710 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox5P35710 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox5P35710 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox5P35710 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sox5P35710 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox5P35710 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox5P35710 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox5P35710 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Sox5P35710 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox5P35710 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Sox5P35710 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Sox5P35710 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sox5P35710 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox5P35710 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.79■□□□□ 0.28
Sox5P35710 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.79■□□□□ 0.28
Sox5P35710 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox5P35710 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox5P35710 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.79■□□□□ 0.28
Sox5P35710 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Sox5P35710 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox5P35710 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox5P35710 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sox5P35710 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sox5P35710 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sox5P35710 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.79■□□□□ 0.28
Sox5P35710 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox5P35710 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Sox5P35710 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox5P35710 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox5P35710 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Sox5P35710 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sox5P35710 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox5P35710 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sox5P35710 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Sox5P35710 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox5P35710 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox5P35710 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox5P35710 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.78■□□□□ 0.28
Sox5P35710 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.78■□□□□ 0.28
Sox5P35710 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sox5P35710 Gm19164-201ENSMUST00000210667 640 ntBASIC16.78■□□□□ 0.28
Sox5P35710 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.78■□□□□ 0.28
Sox5P35710 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox5P35710 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.78■□□□□ 0.28
Sox5P35710 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms