Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Rbfox2-208ENSMUST00000227930 1218 ntBASIC19.86■□□□□ 0.77
Hoxc9P09633 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hoxc9P09633 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hoxc9P09633 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hoxc9P09633 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Hoxc9P09633 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC19.86■□□□□ 0.77
Hoxc9P09633 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Hoxc9P09633 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hoxc9P09633 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hoxc9P09633 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hoxc9P09633 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hoxc9P09633 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hoxc9P09633 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Hoxc9P09633 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.85■□□□□ 0.77
Hoxc9P09633 Gm12428-201ENSMUST00000119844 727 ntBASIC19.85■□□□□ 0.77
Hoxc9P09633 Gm12151-201ENSMUST00000121374 290 ntBASIC19.85■□□□□ 0.77
Hoxc9P09633 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Hoxc9P09633 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hoxc9P09633 Gm38225-201ENSMUST00000194001 393 ntBASIC19.85■□□□□ 0.77
Hoxc9P09633 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Hoxc9P09633 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hoxc9P09633 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC19.85■□□□□ 0.77
Hoxc9P09633 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hoxc9P09633 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hoxc9P09633 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC19.85■□□□□ 0.77
Hoxc9P09633 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Hoxc9P09633 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hoxc9P09633 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC19.85■□□□□ 0.77
Hoxc9P09633 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Hoxc9P09633 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxc9P09633 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxc9P09633 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxc9P09633 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxc9P09633 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxc9P09633 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxc9P09633 Gm42934-201ENSMUST00000196920 1345 ntBASIC19.84■□□□□ 0.77
Hoxc9P09633 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxc9P09633 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxc9P09633 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC19.84■□□□□ 0.77
Hoxc9P09633 Gm9824-201ENSMUST00000178707 561 ntBASIC19.84■□□□□ 0.77
Hoxc9P09633 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC19.84■□□□□ 0.77
Hoxc9P09633 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxc9P09633 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxc9P09633 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxc9P09633 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxc9P09633 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.84■□□□□ 0.77
Hoxc9P09633 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxc9P09633 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxc9P09633 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxc9P09633 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxc9P09633 Gm13233-201ENSMUST00000118760 1443 ntBASIC19.84■□□□□ 0.77
Hoxc9P09633 Gm13244-201ENSMUST00000118855 1446 ntBASIC19.84■□□□□ 0.77
Hoxc9P09633 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxc9P09633 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxc9P09633 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hoxc9P09633 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hoxc9P09633 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hoxc9P09633 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hoxc9P09633 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Hoxc9P09633 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hoxc9P09633 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Hoxc9P09633 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Hoxc9P09633 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.83■□□□□ 0.77
Hoxc9P09633 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
Hoxc9P09633 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC19.83■□□□□ 0.77
Hoxc9P09633 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Hoxc9P09633 Gm27306-201ENSMUST00000183970 107 ntBASIC19.83■□□□□ 0.77
Hoxc9P09633 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Hoxc9P09633 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC19.83■□□□□ 0.77
Hoxc9P09633 AC069562.2-201ENSMUST00000224644 2146 ntBASIC19.83■□□□□ 0.77
Hoxc9P09633 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hoxc9P09633 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Hoxc9P09633 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Hoxc9P09633 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Hoxc9P09633 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hoxc9P09633 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hoxc9P09633 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hoxc9P09633 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hoxc9P09633 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hoxc9P09633 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Hoxc9P09633 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hoxc9P09633 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hoxc9P09633 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Hoxc9P09633 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Hoxc9P09633 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hoxc9P09633 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Hoxc9P09633 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Hoxc9P09633 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hoxc9P09633 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hoxc9P09633 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hoxc9P09633 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hoxc9P09633 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hoxc9P09633 Gm27920-201ENSMUST00000183953 96 ntBASIC19.82■□□□□ 0.76
Hoxc9P09633 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC19.82■□□□□ 0.76
Hoxc9P09633 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hoxc9P09633 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hoxc9P09633 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Hoxc9P09633 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hoxc9P09633 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Hoxc9P09633 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms