Protein–RNA interactions for Protein: P03980

Ig heavy chain V region TEPC 1017, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P03980 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P03980 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
P03980 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P03980 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
P03980 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
P03980 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
P03980 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
P03980 Gm13337-201ENSMUST00000119183 1594 ntBASIC11.9□□□□□ -0.5
P03980 Gm11860-201ENSMUST00000122346 1010 ntBASIC11.9□□□□□ -0.5
P03980 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC11.9□□□□□ -0.5
P03980 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC11.9□□□□□ -0.5
P03980 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
P03980 AC134329.2-201ENSMUST00000217897 428 ntBASIC11.9□□□□□ -0.5
P03980 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC11.9□□□□□ -0.5
P03980 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P03980 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P03980 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P03980 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P03980 Gm9987-201ENSMUST00000069768 567 ntBASIC11.9□□□□□ -0.5
P03980 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P03980 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
P03980 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P03980 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P03980 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
P03980 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
P03980 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC11.9□□□□□ -0.5
P03980 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
P03980 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
P03980 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
P03980 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
P03980 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
P03980 Ap5m1-205ENSMUST00000227431 3757 ntBASIC11.9□□□□□ -0.51
P03980 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
P03980 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
P03980 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC11.9□□□□□ -0.51
P03980 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P03980 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
P03980 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
P03980 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P03980 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
P03980 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P03980 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC11.89□□□□□ -0.51
P03980 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P03980 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
P03980 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
P03980 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC11.89□□□□□ -0.51
P03980 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
P03980 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P03980 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
P03980 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC11.89□□□□□ -0.51
P03980 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC11.89□□□□□ -0.51
P03980 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC11.89□□□□□ -0.51
P03980 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P03980 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
P03980 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
P03980 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
P03980 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
P03980 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P03980 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P03980 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P03980 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P03980 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P03980 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
P03980 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
P03980 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P03980 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P03980 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P03980 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P03980 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
P03980 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
P03980 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
P03980 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
P03980 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P03980 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
P03980 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P03980 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC11.88□□□□□ -0.51
P03980 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P03980 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
P03980 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
P03980 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
P03980 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
P03980 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P03980 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
P03980 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P03980 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
P03980 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P03980 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P03980 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
P03980 Gm15039-201ENSMUST00000118914 875 ntBASIC11.88□□□□□ -0.51
P03980 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
P03980 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC11.88□□□□□ -0.51
P03980 Gm7507-201ENSMUST00000183053 1008 ntBASIC11.88□□□□□ -0.51
P03980 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
P03980 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P03980 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P03980 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
P03980 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
P03980 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
P03980 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
P03980 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms