Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trdmt1O55055 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trdmt1O55055 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Trdmt1O55055 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trdmt1O55055 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trdmt1O55055 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trdmt1O55055 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trdmt1O55055 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.88■□□□□ 0.29
Trdmt1O55055 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trdmt1O55055 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trdmt1O55055 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trdmt1O55055 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Trdmt1O55055 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trdmt1O55055 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.88■□□□□ 0.29
Trdmt1O55055 Gm18737-201ENSMUST00000173594 937 ntBASIC16.88■□□□□ 0.29
Trdmt1O55055 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.88■□□□□ 0.29
Trdmt1O55055 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trdmt1O55055 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trdmt1O55055 AC159621.2-201ENSMUST00000223519 1326 ntBASIC16.88■□□□□ 0.29
Trdmt1O55055 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trdmt1O55055 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trdmt1O55055 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trdmt1O55055 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trdmt1O55055 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trdmt1O55055 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.87■□□□□ 0.29
Trdmt1O55055 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Trdmt1O55055 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trdmt1O55055 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trdmt1O55055 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trdmt1O55055 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trdmt1O55055 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trdmt1O55055 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trdmt1O55055 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trdmt1O55055 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trdmt1O55055 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trdmt1O55055 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trdmt1O55055 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trdmt1O55055 Gm37277-201ENSMUST00000194052 1111 ntBASIC16.87■□□□□ 0.29
Trdmt1O55055 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC16.87■□□□□ 0.29
Trdmt1O55055 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC16.87■□□□□ 0.29
Trdmt1O55055 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC16.87■□□□□ 0.29
Trdmt1O55055 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trdmt1O55055 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trdmt1O55055 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trdmt1O55055 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.87■□□□□ 0.29
Trdmt1O55055 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trdmt1O55055 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Trdmt1O55055 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trdmt1O55055 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trdmt1O55055 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trdmt1O55055 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trdmt1O55055 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trdmt1O55055 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.86■□□□□ 0.29
Trdmt1O55055 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trdmt1O55055 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trdmt1O55055 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trdmt1O55055 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trdmt1O55055 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trdmt1O55055 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.86■□□□□ 0.29
Trdmt1O55055 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trdmt1O55055 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC16.86■□□□□ 0.29
Trdmt1O55055 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Trdmt1O55055 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC16.86■□□□□ 0.29
Trdmt1O55055 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trdmt1O55055 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trdmt1O55055 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trdmt1O55055 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trdmt1O55055 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trdmt1O55055 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Trdmt1O55055 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trdmt1O55055 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.86■□□□□ 0.29
Trdmt1O55055 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.86■□□□□ 0.29
Trdmt1O55055 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Trdmt1O55055 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trdmt1O55055 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trdmt1O55055 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trdmt1O55055 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
Trdmt1O55055 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trdmt1O55055 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trdmt1O55055 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Trdmt1O55055 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Trdmt1O55055 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Trdmt1O55055 Gm27618-201ENSMUST00000183671 60 ntBASIC16.85■□□□□ 0.29
Trdmt1O55055 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC16.85■□□□□ 0.29
Trdmt1O55055 Gm5626-201ENSMUST00000222151 1058 ntBASIC16.85■□□□□ 0.29
Trdmt1O55055 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trdmt1O55055 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trdmt1O55055 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC16.85■□□□□ 0.29
Trdmt1O55055 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trdmt1O55055 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.85■□□□□ 0.29
Trdmt1O55055 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trdmt1O55055 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trdmt1O55055 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trdmt1O55055 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trdmt1O55055 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.84■□□□□ 0.29
Trdmt1O55055 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trdmt1O55055 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trdmt1O55055 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trdmt1O55055 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Trdmt1O55055 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms