Protein–RNA interactions for Protein: A0A0B4J1F6

BC053393, cDNA sequence BC053393, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC053393A0A0B4J1F6 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.35□□□□□ -0.43
BC053393A0A0B4J1F6 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
BC053393A0A0B4J1F6 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
BC053393A0A0B4J1F6 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
BC053393A0A0B4J1F6 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
BC053393A0A0B4J1F6 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
BC053393A0A0B4J1F6 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
BC053393A0A0B4J1F6 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
BC053393A0A0B4J1F6 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
BC053393A0A0B4J1F6 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
BC053393A0A0B4J1F6 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
BC053393A0A0B4J1F6 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
BC053393A0A0B4J1F6 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
BC053393A0A0B4J1F6 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
BC053393A0A0B4J1F6 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
BC053393A0A0B4J1F6 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
BC053393A0A0B4J1F6 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.35□□□□□ -0.43
BC053393A0A0B4J1F6 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
BC053393A0A0B4J1F6 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
BC053393A0A0B4J1F6 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
BC053393A0A0B4J1F6 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
BC053393A0A0B4J1F6 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
BC053393A0A0B4J1F6 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BC053393A0A0B4J1F6 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BC053393A0A0B4J1F6 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
BC053393A0A0B4J1F6 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BC053393A0A0B4J1F6 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
BC053393A0A0B4J1F6 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
BC053393A0A0B4J1F6 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
BC053393A0A0B4J1F6 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BC053393A0A0B4J1F6 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.34□□□□□ -0.43
BC053393A0A0B4J1F6 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
BC053393A0A0B4J1F6 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
BC053393A0A0B4J1F6 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.34□□□□□ -0.43
BC053393A0A0B4J1F6 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC12.34□□□□□ -0.43
BC053393A0A0B4J1F6 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
BC053393A0A0B4J1F6 Gm12134-201ENSMUST00000122109 520 ntBASIC12.34□□□□□ -0.43
BC053393A0A0B4J1F6 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.34□□□□□ -0.43
BC053393A0A0B4J1F6 AC121577.1-201ENSMUST00000227302 707 ntBASIC12.34□□□□□ -0.43
BC053393A0A0B4J1F6 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BC053393A0A0B4J1F6 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BC053393A0A0B4J1F6 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BC053393A0A0B4J1F6 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
BC053393A0A0B4J1F6 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
BC053393A0A0B4J1F6 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.34□□□□□ -0.43
BC053393A0A0B4J1F6 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BC053393A0A0B4J1F6 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BC053393A0A0B4J1F6 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BC053393A0A0B4J1F6 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BC053393A0A0B4J1F6 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
BC053393A0A0B4J1F6 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
BC053393A0A0B4J1F6 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
BC053393A0A0B4J1F6 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.34□□□□□ -0.43
BC053393A0A0B4J1F6 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
BC053393A0A0B4J1F6 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC12.34□□□□□ -0.43
BC053393A0A0B4J1F6 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BC053393A0A0B4J1F6 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
BC053393A0A0B4J1F6 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.33□□□□□ -0.44
BC053393A0A0B4J1F6 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
BC053393A0A0B4J1F6 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.33□□□□□ -0.44
BC053393A0A0B4J1F6 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
BC053393A0A0B4J1F6 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
BC053393A0A0B4J1F6 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.33□□□□□ -0.44
BC053393A0A0B4J1F6 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
BC053393A0A0B4J1F6 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
BC053393A0A0B4J1F6 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
BC053393A0A0B4J1F6 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
BC053393A0A0B4J1F6 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
BC053393A0A0B4J1F6 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.33□□□□□ -0.44
BC053393A0A0B4J1F6 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
BC053393A0A0B4J1F6 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.33□□□□□ -0.44
BC053393A0A0B4J1F6 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC12.33□□□□□ -0.44
BC053393A0A0B4J1F6 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
BC053393A0A0B4J1F6 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.33□□□□□ -0.44
BC053393A0A0B4J1F6 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
BC053393A0A0B4J1F6 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
BC053393A0A0B4J1F6 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.33□□□□□ -0.44
BC053393A0A0B4J1F6 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
BC053393A0A0B4J1F6 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
BC053393A0A0B4J1F6 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
BC053393A0A0B4J1F6 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
BC053393A0A0B4J1F6 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
BC053393A0A0B4J1F6 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.33□□□□□ -0.44
BC053393A0A0B4J1F6 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
BC053393A0A0B4J1F6 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.33□□□□□ -0.44
BC053393A0A0B4J1F6 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
BC053393A0A0B4J1F6 Gm6858-201ENSMUST00000208582 1468 ntBASIC12.33□□□□□ -0.44
BC053393A0A0B4J1F6 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
BC053393A0A0B4J1F6 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.32□□□□□ -0.44
BC053393A0A0B4J1F6 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.32□□□□□ -0.44
BC053393A0A0B4J1F6 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.32□□□□□ -0.44
BC053393A0A0B4J1F6 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
BC053393A0A0B4J1F6 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.32□□□□□ -0.44
BC053393A0A0B4J1F6 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
BC053393A0A0B4J1F6 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
BC053393A0A0B4J1F6 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
BC053393A0A0B4J1F6 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
BC053393A0A0B4J1F6 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
BC053393A0A0B4J1F6 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
BC053393A0A0B4J1F6 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms