Protein–RNA interactions for Protein: Q9NUV7

SPTLC3, Serine palmitoyltransferase 3, humanhuman

Predictions only

Length 552 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3Q9NUV7 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
SPTLC3Q9NUV7 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPTLC3Q9NUV7 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPTLC3Q9NUV7 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SPTLC3Q9NUV7 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.18■□□□□ 0.82
SPTLC3Q9NUV7 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.18■□□□□ 0.82
SPTLC3Q9NUV7 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.18■□□□□ 0.82
SPTLC3Q9NUV7 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SPTLC3Q9NUV7 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.18■□□□□ 0.82
SPTLC3Q9NUV7 MTDHP1-201ENST00000605323 784 ntBASIC20.18■□□□□ 0.82
SPTLC3Q9NUV7 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.18■□□□□ 0.82
SPTLC3Q9NUV7 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SPTLC3Q9NUV7 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SPTLC3Q9NUV7 UBALD1-205ENST00000590891 2641 ntBASIC20.18■□□□□ 0.82
SPTLC3Q9NUV7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SPTLC3Q9NUV7 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.18■□□□□ 0.82
SPTLC3Q9NUV7 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SPTLC3Q9NUV7 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
SPTLC3Q9NUV7 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC20.17■□□□□ 0.82
SPTLC3Q9NUV7 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
SPTLC3Q9NUV7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPTLC3Q9NUV7 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.17■□□□□ 0.82
SPTLC3Q9NUV7 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPTLC3Q9NUV7 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SPTLC3Q9NUV7 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPTLC3Q9NUV7 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPTLC3Q9NUV7 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPTLC3Q9NUV7 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
SPTLC3Q9NUV7 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPTLC3Q9NUV7 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPTLC3Q9NUV7 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPTLC3Q9NUV7 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.17■□□□□ 0.82
SPTLC3Q9NUV7 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPTLC3Q9NUV7 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPTLC3Q9NUV7 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SPTLC3Q9NUV7 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.17■□□□□ 0.82
SPTLC3Q9NUV7 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.17■□□□□ 0.82
SPTLC3Q9NUV7 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.17■□□□□ 0.82
SPTLC3Q9NUV7 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SPTLC3Q9NUV7 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
SPTLC3Q9NUV7 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SPTLC3Q9NUV7 PCDHB19P-201ENST00000570871 2371 ntBASIC20.17■□□□□ 0.82
SPTLC3Q9NUV7 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SPTLC3Q9NUV7 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPTLC3Q9NUV7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPTLC3Q9NUV7 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SPTLC3Q9NUV7 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.17■□□□□ 0.82
SPTLC3Q9NUV7 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPTLC3Q9NUV7 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.17■□□□□ 0.82
SPTLC3Q9NUV7 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SPTLC3Q9NUV7 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SPTLC3Q9NUV7 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.17■□□□□ 0.82
SPTLC3Q9NUV7 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SPTLC3Q9NUV7 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC20.16■□□□□ 0.82
SPTLC3Q9NUV7 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.16■□□□□ 0.82
SPTLC3Q9NUV7 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SPTLC3Q9NUV7 HTR7P1-202ENST00000624664 4411 ntBASIC20.16■□□□□ 0.82
SPTLC3Q9NUV7 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPTLC3Q9NUV7 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SPTLC3Q9NUV7 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPTLC3Q9NUV7 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPTLC3Q9NUV7 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPTLC3Q9NUV7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPTLC3Q9NUV7 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPTLC3Q9NUV7 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.16■□□□□ 0.82
SPTLC3Q9NUV7 AC069544.1-201ENST00000609399 999 ntBASIC20.16■□□□□ 0.82
SPTLC3Q9NUV7 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPTLC3Q9NUV7 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.16■□□□□ 0.82
SPTLC3Q9NUV7 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SPTLC3Q9NUV7 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SPTLC3Q9NUV7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPTLC3Q9NUV7 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPTLC3Q9NUV7 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPTLC3Q9NUV7 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPTLC3Q9NUV7 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPTLC3Q9NUV7 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SPTLC3Q9NUV7 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SPTLC3Q9NUV7 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPTLC3Q9NUV7 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SPTLC3Q9NUV7 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPTLC3Q9NUV7 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC20.15■□□□□ 0.82
SPTLC3Q9NUV7 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPTLC3Q9NUV7 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SPTLC3Q9NUV7 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPTLC3Q9NUV7 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPTLC3Q9NUV7 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
SPTLC3Q9NUV7 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.15■□□□□ 0.82
SPTLC3Q9NUV7 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.15■□□□□ 0.82
SPTLC3Q9NUV7 POU5F1P3-201ENST00000428824 1078 ntBASIC20.15■□□□□ 0.82
SPTLC3Q9NUV7 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.15■□□□□ 0.82
SPTLC3Q9NUV7 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.15■□□□□ 0.82
SPTLC3Q9NUV7 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.15■□□□□ 0.82
SPTLC3Q9NUV7 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.15■□□□□ 0.82
SPTLC3Q9NUV7 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPTLC3Q9NUV7 KRT8P11-201ENST00000409686 1436 ntBASIC20.15■□□□□ 0.82
SPTLC3Q9NUV7 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SPTLC3Q9NUV7 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPTLC3Q9NUV7 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SPTLC3Q9NUV7 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPTLC3Q9NUV7 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms