Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.07□□□□□ -0.16
Lims1Q99JW4 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.07□□□□□ -0.16
Lims1Q99JW4 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lims1Q99JW4 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lims1Q99JW4 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Lims1Q99JW4 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.07□□□□□ -0.16
Lims1Q99JW4 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lims1Q99JW4 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.06□□□□□ -0.16
Lims1Q99JW4 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lims1Q99JW4 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lims1Q99JW4 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Lims1Q99JW4 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lims1Q99JW4 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lims1Q99JW4 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Lims1Q99JW4 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lims1Q99JW4 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lims1Q99JW4 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lims1Q99JW4 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lims1Q99JW4 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lims1Q99JW4 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Lims1Q99JW4 Gm12134-201ENSMUST00000122109 520 ntBASIC14.06□□□□□ -0.16
Lims1Q99JW4 Olfr129-201ENSMUST00000122318 993 ntBASIC14.06□□□□□ -0.16
Lims1Q99JW4 Rprl3-201ENSMUST00000157400 290 ntBASIC14.06□□□□□ -0.16
Lims1Q99JW4 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Lims1Q99JW4 Gm19164-201ENSMUST00000210667 640 ntBASIC14.06□□□□□ -0.16
Lims1Q99JW4 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lims1Q99JW4 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lims1Q99JW4 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lims1Q99JW4 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lims1Q99JW4 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lims1Q99JW4 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Lims1Q99JW4 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lims1Q99JW4 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lims1Q99JW4 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.06□□□□□ -0.16
Lims1Q99JW4 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.06□□□□□ -0.16
Lims1Q99JW4 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lims1Q99JW4 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lims1Q99JW4 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lims1Q99JW4 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.05□□□□□ -0.16
Lims1Q99JW4 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lims1Q99JW4 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lims1Q99JW4 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lims1Q99JW4 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lims1Q99JW4 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lims1Q99JW4 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lims1Q99JW4 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lims1Q99JW4 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lims1Q99JW4 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Lims1Q99JW4 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lims1Q99JW4 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.05□□□□□ -0.16
Lims1Q99JW4 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lims1Q99JW4 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lims1Q99JW4 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Lims1Q99JW4 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lims1Q99JW4 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.05□□□□□ -0.16
Lims1Q99JW4 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lims1Q99JW4 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lims1Q99JW4 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.05□□□□□ -0.16
Lims1Q99JW4 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lims1Q99JW4 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lims1Q99JW4 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lims1Q99JW4 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lims1Q99JW4 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lims1Q99JW4 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lims1Q99JW4 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Lims1Q99JW4 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lims1Q99JW4 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.05□□□□□ -0.16
Lims1Q99JW4 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.05□□□□□ -0.16
Lims1Q99JW4 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lims1Q99JW4 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lims1Q99JW4 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lims1Q99JW4 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lims1Q99JW4 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lims1Q99JW4 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lims1Q99JW4 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lims1Q99JW4 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Lims1Q99JW4 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lims1Q99JW4 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.04□□□□□ -0.16
Lims1Q99JW4 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lims1Q99JW4 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lims1Q99JW4 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.04□□□□□ -0.16
Lims1Q99JW4 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Lims1Q99JW4 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Lims1Q99JW4 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lims1Q99JW4 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lims1Q99JW4 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Lims1Q99JW4 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lims1Q99JW4 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lims1Q99JW4 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lims1Q99JW4 Gm44454-201ENSMUST00000198541 138 ntBASIC14.04□□□□□ -0.16
Lims1Q99JW4 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.04□□□□□ -0.16
Lims1Q99JW4 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lims1Q99JW4 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lims1Q99JW4 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Lims1Q99JW4 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lims1Q99JW4 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lims1Q99JW4 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lims1Q99JW4 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Lims1Q99JW4 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lims1Q99JW4 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms