Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smc1bQ920F6 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smc1bQ920F6 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Smc1bQ920F6 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC17.77■□□□□ 0.44
Smc1bQ920F6 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Smc1bQ920F6 Gm27321-201ENSMUST00000185021 205 ntBASIC17.77■□□□□ 0.44
Smc1bQ920F6 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.77■□□□□ 0.44
Smc1bQ920F6 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.77■□□□□ 0.44
Smc1bQ920F6 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.77■□□□□ 0.44
Smc1bQ920F6 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smc1bQ920F6 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smc1bQ920F6 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Smc1bQ920F6 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.77■□□□□ 0.43
Smc1bQ920F6 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.77■□□□□ 0.43
Smc1bQ920F6 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Smc1bQ920F6 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Smc1bQ920F6 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smc1bQ920F6 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smc1bQ920F6 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.76■□□□□ 0.43
Smc1bQ920F6 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Smc1bQ920F6 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smc1bQ920F6 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smc1bQ920F6 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smc1bQ920F6 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Smc1bQ920F6 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Smc1bQ920F6 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smc1bQ920F6 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Smc1bQ920F6 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smc1bQ920F6 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smc1bQ920F6 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smc1bQ920F6 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smc1bQ920F6 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.76■□□□□ 0.43
Smc1bQ920F6 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Smc1bQ920F6 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smc1bQ920F6 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smc1bQ920F6 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Smc1bQ920F6 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smc1bQ920F6 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Smc1bQ920F6 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smc1bQ920F6 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smc1bQ920F6 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smc1bQ920F6 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.75■□□□□ 0.43
Smc1bQ920F6 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Smc1bQ920F6 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Smc1bQ920F6 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smc1bQ920F6 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smc1bQ920F6 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Smc1bQ920F6 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Smc1bQ920F6 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smc1bQ920F6 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Smc1bQ920F6 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC17.75■□□□□ 0.43
Smc1bQ920F6 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC17.75■□□□□ 0.43
Smc1bQ920F6 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.75■□□□□ 0.43
Smc1bQ920F6 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC17.75■□□□□ 0.43
Smc1bQ920F6 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.75■□□□□ 0.43
Smc1bQ920F6 AC139382.1-201ENSMUST00000221402 498 ntBASIC17.75■□□□□ 0.43
Smc1bQ920F6 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.75■□□□□ 0.43
Smc1bQ920F6 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smc1bQ920F6 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smc1bQ920F6 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smc1bQ920F6 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smc1bQ920F6 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smc1bQ920F6 Gm13127-201ENSMUST00000118978 1389 ntBASIC17.75■□□□□ 0.43
Smc1bQ920F6 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smc1bQ920F6 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc1bQ920F6 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smc1bQ920F6 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc1bQ920F6 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc1bQ920F6 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smc1bQ920F6 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc1bQ920F6 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Smc1bQ920F6 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc1bQ920F6 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smc1bQ920F6 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc1bQ920F6 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc1bQ920F6 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smc1bQ920F6 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc1bQ920F6 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smc1bQ920F6 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Smc1bQ920F6 Gm5682-201ENSMUST00000173402 505 ntBASIC17.74■□□□□ 0.43
Smc1bQ920F6 Gm27646-201ENSMUST00000183989 110 ntBASIC17.74■□□□□ 0.43
Smc1bQ920F6 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Smc1bQ920F6 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc1bQ920F6 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc1bQ920F6 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc1bQ920F6 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc1bQ920F6 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc1bQ920F6 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Smc1bQ920F6 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc1bQ920F6 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Smc1bQ920F6 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc1bQ920F6 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc1bQ920F6 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc1bQ920F6 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc1bQ920F6 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Smc1bQ920F6 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Smc1bQ920F6 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
Smc1bQ920F6 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Smc1bQ920F6 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smc1bQ920F6 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms