Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb4Q91XZ6 Gm25406-201ENSMUST00000157599 105 ntBASIC15.35■□□□□ 0.05
Pcdhb4Q91XZ6 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb4Q91XZ6 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb4Q91XZ6 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb4Q91XZ6 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.35■□□□□ 0.05
Pcdhb4Q91XZ6 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Pcdhb4Q91XZ6 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb4Q91XZ6 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb4Q91XZ6 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb4Q91XZ6 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb4Q91XZ6 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb4Q91XZ6 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb4Q91XZ6 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb4Q91XZ6 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb4Q91XZ6 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb4Q91XZ6 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb4Q91XZ6 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Pcdhb4Q91XZ6 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.35■□□□□ 0.05
Pcdhb4Q91XZ6 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb4Q91XZ6 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb4Q91XZ6 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb4Q91XZ6 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb4Q91XZ6 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdhb4Q91XZ6 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb4Q91XZ6 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb4Q91XZ6 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Pcdhb4Q91XZ6 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb4Q91XZ6 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb4Q91XZ6 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb4Q91XZ6 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb4Q91XZ6 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.34■□□□□ 0.05
Pcdhb4Q91XZ6 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.34■□□□□ 0.05
Pcdhb4Q91XZ6 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb4Q91XZ6 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb4Q91XZ6 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb4Q91XZ6 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb4Q91XZ6 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb4Q91XZ6 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb4Q91XZ6 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb4Q91XZ6 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhb4Q91XZ6 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb4Q91XZ6 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb4Q91XZ6 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb4Q91XZ6 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Pcdhb4Q91XZ6 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb4Q91XZ6 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb4Q91XZ6 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb4Q91XZ6 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb4Q91XZ6 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb4Q91XZ6 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb4Q91XZ6 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb4Q91XZ6 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb4Q91XZ6 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Pcdhb4Q91XZ6 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Pcdhb4Q91XZ6 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.33■□□□□ 0.04
Pcdhb4Q91XZ6 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb4Q91XZ6 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Pcdhb4Q91XZ6 Gm44454-201ENSMUST00000198541 138 ntBASIC15.33■□□□□ 0.04
Pcdhb4Q91XZ6 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.33■□□□□ 0.04
Pcdhb4Q91XZ6 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb4Q91XZ6 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.33■□□□□ 0.04
Pcdhb4Q91XZ6 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb4Q91XZ6 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb4Q91XZ6 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb4Q91XZ6 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.33■□□□□ 0.04
Pcdhb4Q91XZ6 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb4Q91XZ6 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb4Q91XZ6 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb4Q91XZ6 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.33■□□□□ 0.04
Pcdhb4Q91XZ6 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb4Q91XZ6 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdhb4Q91XZ6 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Pcdhb4Q91XZ6 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb4Q91XZ6 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb4Q91XZ6 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.32■□□□□ 0.04
Pcdhb4Q91XZ6 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Pcdhb4Q91XZ6 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb4Q91XZ6 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb4Q91XZ6 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb4Q91XZ6 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb4Q91XZ6 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb4Q91XZ6 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdhb4Q91XZ6 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Pcdhb4Q91XZ6 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb4Q91XZ6 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb4Q91XZ6 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.32■□□□□ 0.04
Pcdhb4Q91XZ6 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.32■□□□□ 0.04
Pcdhb4Q91XZ6 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.32■□□□□ 0.04
Pcdhb4Q91XZ6 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb4Q91XZ6 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb4Q91XZ6 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Pcdhb4Q91XZ6 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb4Q91XZ6 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb4Q91XZ6 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb4Q91XZ6 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb4Q91XZ6 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb4Q91XZ6 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdhb4Q91XZ6 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Pcdhb4Q91XZ6 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms