Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slf1Q8R3P9 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slf1Q8R3P9 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slf1Q8R3P9 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.62■□□□□ 0.09
Slf1Q8R3P9 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Slf1Q8R3P9 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slf1Q8R3P9 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.62■□□□□ 0.09
Slf1Q8R3P9 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Slf1Q8R3P9 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slf1Q8R3P9 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.62■□□□□ 0.09
Slf1Q8R3P9 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slf1Q8R3P9 Gm10566-201ENSMUST00000086739 996 ntBASIC15.62■□□□□ 0.09
Slf1Q8R3P9 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Slf1Q8R3P9 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.62■□□□□ 0.09
Slf1Q8R3P9 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slf1Q8R3P9 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slf1Q8R3P9 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slf1Q8R3P9 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slf1Q8R3P9 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slf1Q8R3P9 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slf1Q8R3P9 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slf1Q8R3P9 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slf1Q8R3P9 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slf1Q8R3P9 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slf1Q8R3P9 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slf1Q8R3P9 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slf1Q8R3P9 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Slf1Q8R3P9 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Slf1Q8R3P9 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Slf1Q8R3P9 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Slf1Q8R3P9 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slf1Q8R3P9 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slf1Q8R3P9 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Slf1Q8R3P9 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Slf1Q8R3P9 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Slf1Q8R3P9 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.61■□□□□ 0.09
Slf1Q8R3P9 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.61■□□□□ 0.09
Slf1Q8R3P9 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.61■□□□□ 0.09
Slf1Q8R3P9 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slf1Q8R3P9 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Slf1Q8R3P9 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Slf1Q8R3P9 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Slf1Q8R3P9 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
Slf1Q8R3P9 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slf1Q8R3P9 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.61■□□□□ 0.09
Slf1Q8R3P9 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slf1Q8R3P9 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.61■□□□□ 0.09
Slf1Q8R3P9 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slf1Q8R3P9 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slf1Q8R3P9 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Slf1Q8R3P9 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Slf1Q8R3P9 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Slf1Q8R3P9 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Slf1Q8R3P9 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Slf1Q8R3P9 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.6■□□□□ 0.09
Slf1Q8R3P9 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Slf1Q8R3P9 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Slf1Q8R3P9 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Slf1Q8R3P9 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Slf1Q8R3P9 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.6■□□□□ 0.09
Slf1Q8R3P9 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC15.6■□□□□ 0.09
Slf1Q8R3P9 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Slf1Q8R3P9 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Slf1Q8R3P9 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Slf1Q8R3P9 Mir1668-201ENSMUST00000184114 107 ntBASIC15.6■□□□□ 0.09
Slf1Q8R3P9 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.6■□□□□ 0.09
Slf1Q8R3P9 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Slf1Q8R3P9 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Slf1Q8R3P9 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Slf1Q8R3P9 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Slf1Q8R3P9 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.6■□□□□ 0.09
Slf1Q8R3P9 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Slf1Q8R3P9 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Slf1Q8R3P9 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Slf1Q8R3P9 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Slf1Q8R3P9 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.6■□□□□ 0.09
Slf1Q8R3P9 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Slf1Q8R3P9 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slf1Q8R3P9 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slf1Q8R3P9 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slf1Q8R3P9 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slf1Q8R3P9 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slf1Q8R3P9 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slf1Q8R3P9 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC15.59■□□□□ 0.09
Slf1Q8R3P9 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slf1Q8R3P9 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Slf1Q8R3P9 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slf1Q8R3P9 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slf1Q8R3P9 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Slf1Q8R3P9 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.59■□□□□ 0.09
Slf1Q8R3P9 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slf1Q8R3P9 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slf1Q8R3P9 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slf1Q8R3P9 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Slf1Q8R3P9 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.59■□□□□ 0.09
Slf1Q8R3P9 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.59■□□□□ 0.09
Slf1Q8R3P9 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slf1Q8R3P9 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slf1Q8R3P9 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slf1Q8R3P9 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms