Protein–RNA interactions for Protein: Q8C735

Lin9, Protein lin-9 homolog, mousemouse

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin9Q8C735 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lin9Q8C735 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.86■□□□□ 0.29
Lin9Q8C735 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.86■□□□□ 0.29
Lin9Q8C735 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lin9Q8C735 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Lin9Q8C735 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lin9Q8C735 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lin9Q8C735 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lin9Q8C735 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.85■□□□□ 0.29
Lin9Q8C735 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lin9Q8C735 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lin9Q8C735 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lin9Q8C735 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lin9Q8C735 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lin9Q8C735 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lin9Q8C735 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.85■□□□□ 0.29
Lin9Q8C735 Gm8097-201ENSMUST00000117903 829 ntBASIC16.85■□□□□ 0.29
Lin9Q8C735 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lin9Q8C735 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lin9Q8C735 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.85■□□□□ 0.29
Lin9Q8C735 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.85■□□□□ 0.29
Lin9Q8C735 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.85■□□□□ 0.29
Lin9Q8C735 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lin9Q8C735 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lin9Q8C735 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lin9Q8C735 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Lin9Q8C735 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lin9Q8C735 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lin9Q8C735 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lin9Q8C735 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lin9Q8C735 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.85■□□□□ 0.29
Lin9Q8C735 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lin9Q8C735 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Lin9Q8C735 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Lin9Q8C735 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lin9Q8C735 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.84■□□□□ 0.29
Lin9Q8C735 Gm4459-201ENSMUST00000118750 468 ntBASIC16.84■□□□□ 0.29
Lin9Q8C735 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.84■□□□□ 0.29
Lin9Q8C735 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.84■□□□□ 0.29
Lin9Q8C735 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.84■□□□□ 0.29
Lin9Q8C735 Gm2213-201ENSMUST00000197485 688 ntBASIC16.84■□□□□ 0.29
Lin9Q8C735 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.84■□□□□ 0.29
Lin9Q8C735 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lin9Q8C735 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lin9Q8C735 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lin9Q8C735 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lin9Q8C735 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lin9Q8C735 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lin9Q8C735 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lin9Q8C735 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.84■□□□□ 0.29
Lin9Q8C735 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lin9Q8C735 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Lin9Q8C735 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lin9Q8C735 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Lin9Q8C735 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lin9Q8C735 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lin9Q8C735 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Lin9Q8C735 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Lin9Q8C735 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.83■□□□□ 0.28
Lin9Q8C735 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.83■□□□□ 0.28
Lin9Q8C735 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lin9Q8C735 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lin9Q8C735 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lin9Q8C735 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lin9Q8C735 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Lin9Q8C735 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lin9Q8C735 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lin9Q8C735 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lin9Q8C735 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Lin9Q8C735 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.83■□□□□ 0.28
Lin9Q8C735 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lin9Q8C735 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Lin9Q8C735 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.83■□□□□ 0.28
Lin9Q8C735 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lin9Q8C735 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lin9Q8C735 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lin9Q8C735 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lin9Q8C735 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lin9Q8C735 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lin9Q8C735 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lin9Q8C735 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lin9Q8C735 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lin9Q8C735 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.82■□□□□ 0.28
Lin9Q8C735 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lin9Q8C735 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.82■□□□□ 0.28
Lin9Q8C735 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lin9Q8C735 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lin9Q8C735 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lin9Q8C735 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lin9Q8C735 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lin9Q8C735 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lin9Q8C735 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Lin9Q8C735 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lin9Q8C735 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lin9Q8C735 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.81■□□□□ 0.28
Lin9Q8C735 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.81■□□□□ 0.28
Lin9Q8C735 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lin9Q8C735 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lin9Q8C735 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Lin9Q8C735 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms