Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.54□□□□□ -0.24
Slc5a7Q8BGY9 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Slc5a7Q8BGY9 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Slc5a7Q8BGY9 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Slc5a7Q8BGY9 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Slc5a7Q8BGY9 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Slc5a7Q8BGY9 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Slc5a7Q8BGY9 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc5a7Q8BGY9 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc5a7Q8BGY9 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc5a7Q8BGY9 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc5a7Q8BGY9 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Slc5a7Q8BGY9 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc5a7Q8BGY9 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc5a7Q8BGY9 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc5a7Q8BGY9 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc5a7Q8BGY9 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc5a7Q8BGY9 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Slc5a7Q8BGY9 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Slc5a7Q8BGY9 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC13.53□□□□□ -0.24
Slc5a7Q8BGY9 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Slc5a7Q8BGY9 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc5a7Q8BGY9 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc5a7Q8BGY9 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
Slc5a7Q8BGY9 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc5a7Q8BGY9 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc5a7Q8BGY9 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc5a7Q8BGY9 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Slc5a7Q8BGY9 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc5a7Q8BGY9 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Slc5a7Q8BGY9 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc5a7Q8BGY9 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc5a7Q8BGY9 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc5a7Q8BGY9 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc5a7Q8BGY9 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc5a7Q8BGY9 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc5a7Q8BGY9 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc5a7Q8BGY9 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Slc5a7Q8BGY9 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc5a7Q8BGY9 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc5a7Q8BGY9 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.53□□□□□ -0.24
Slc5a7Q8BGY9 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc5a7Q8BGY9 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Slc5a7Q8BGY9 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Slc5a7Q8BGY9 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Slc5a7Q8BGY9 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Slc5a7Q8BGY9 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.52□□□□□ -0.24
Slc5a7Q8BGY9 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Slc5a7Q8BGY9 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
Slc5a7Q8BGY9 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Slc5a7Q8BGY9 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Slc5a7Q8BGY9 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Slc5a7Q8BGY9 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Slc5a7Q8BGY9 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Slc5a7Q8BGY9 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Slc5a7Q8BGY9 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.52□□□□□ -0.24
Slc5a7Q8BGY9 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Slc5a7Q8BGY9 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Slc5a7Q8BGY9 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc5a7Q8BGY9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc5a7Q8BGY9 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.52□□□□□ -0.25
Slc5a7Q8BGY9 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Slc5a7Q8BGY9 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.52□□□□□ -0.25
Slc5a7Q8BGY9 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Slc5a7Q8BGY9 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Slc5a7Q8BGY9 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.52□□□□□ -0.25
Slc5a7Q8BGY9 AC135637.1-201ENSMUST00000227750 365 ntBASIC13.52□□□□□ -0.25
Slc5a7Q8BGY9 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc5a7Q8BGY9 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Slc5a7Q8BGY9 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Slc5a7Q8BGY9 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc5a7Q8BGY9 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Slc5a7Q8BGY9 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc5a7Q8BGY9 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc5a7Q8BGY9 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc5a7Q8BGY9 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc5a7Q8BGY9 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Slc5a7Q8BGY9 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Slc5a7Q8BGY9 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc5a7Q8BGY9 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Slc5a7Q8BGY9 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc5a7Q8BGY9 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Slc5a7Q8BGY9 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Slc5a7Q8BGY9 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc5a7Q8BGY9 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Slc5a7Q8BGY9 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc5a7Q8BGY9 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc5a7Q8BGY9 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc5a7Q8BGY9 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc5a7Q8BGY9 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc5a7Q8BGY9 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc5a7Q8BGY9 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc5a7Q8BGY9 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Slc5a7Q8BGY9 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc5a7Q8BGY9 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc5a7Q8BGY9 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.51□□□□□ -0.25
Slc5a7Q8BGY9 Spsb2-203ENSMUST00000112473 1322 ntBASIC13.51□□□□□ -0.25
Slc5a7Q8BGY9 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc5a7Q8BGY9 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc5a7Q8BGY9 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms