Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Samm50Q8BGH2 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Samm50Q8BGH2 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Samm50Q8BGH2 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Samm50Q8BGH2 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.09■□□□□ 0.49
Samm50Q8BGH2 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Samm50Q8BGH2 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Samm50Q8BGH2 Gm7461-201ENSMUST00000058918 827 ntBASIC18.09■□□□□ 0.49
Samm50Q8BGH2 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Samm50Q8BGH2 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Samm50Q8BGH2 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Samm50Q8BGH2 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Samm50Q8BGH2 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Samm50Q8BGH2 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Samm50Q8BGH2 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Samm50Q8BGH2 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Samm50Q8BGH2 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Samm50Q8BGH2 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Samm50Q8BGH2 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Samm50Q8BGH2 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Samm50Q8BGH2 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Samm50Q8BGH2 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Samm50Q8BGH2 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Samm50Q8BGH2 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.08■□□□□ 0.48
Samm50Q8BGH2 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Samm50Q8BGH2 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Samm50Q8BGH2 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Samm50Q8BGH2 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Samm50Q8BGH2 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Samm50Q8BGH2 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Samm50Q8BGH2 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Samm50Q8BGH2 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Samm50Q8BGH2 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Samm50Q8BGH2 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Samm50Q8BGH2 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC18.07■□□□□ 0.48
Samm50Q8BGH2 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Samm50Q8BGH2 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Samm50Q8BGH2 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Samm50Q8BGH2 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Samm50Q8BGH2 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Samm50Q8BGH2 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Samm50Q8BGH2 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Samm50Q8BGH2 Gm1818-201ENSMUST00000169406 1184 ntBASIC18.07■□□□□ 0.48
Samm50Q8BGH2 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Samm50Q8BGH2 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.07■□□□□ 0.48
Samm50Q8BGH2 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Samm50Q8BGH2 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Samm50Q8BGH2 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Samm50Q8BGH2 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Samm50Q8BGH2 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Samm50Q8BGH2 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
Samm50Q8BGH2 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Samm50Q8BGH2 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Samm50Q8BGH2 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Samm50Q8BGH2 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC18.06■□□□□ 0.48
Samm50Q8BGH2 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.06■□□□□ 0.48
Samm50Q8BGH2 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC18.06■□□□□ 0.48
Samm50Q8BGH2 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Samm50Q8BGH2 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Samm50Q8BGH2 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Samm50Q8BGH2 Gm28659-201ENSMUST00000188013 759 ntBASIC18.06■□□□□ 0.48
Samm50Q8BGH2 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC18.06■□□□□ 0.48
Samm50Q8BGH2 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Samm50Q8BGH2 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
Samm50Q8BGH2 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Samm50Q8BGH2 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Samm50Q8BGH2 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Samm50Q8BGH2 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Samm50Q8BGH2 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Samm50Q8BGH2 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Samm50Q8BGH2 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Samm50Q8BGH2 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC18.06■□□□□ 0.48
Samm50Q8BGH2 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Samm50Q8BGH2 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Samm50Q8BGH2 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Samm50Q8BGH2 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Samm50Q8BGH2 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Samm50Q8BGH2 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Samm50Q8BGH2 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Samm50Q8BGH2 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Samm50Q8BGH2 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Samm50Q8BGH2 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Samm50Q8BGH2 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Samm50Q8BGH2 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Samm50Q8BGH2 Gm45133-201ENSMUST00000207548 2773 ntBASIC18.05■□□□□ 0.48
Samm50Q8BGH2 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Samm50Q8BGH2 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC18.05■□□□□ 0.48
Samm50Q8BGH2 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Samm50Q8BGH2 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Samm50Q8BGH2 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Samm50Q8BGH2 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Samm50Q8BGH2 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Samm50Q8BGH2 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
Samm50Q8BGH2 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
Samm50Q8BGH2 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.05■□□□□ 0.48
Samm50Q8BGH2 Gm25745-201ENSMUST00000174945 133 ntBASIC18.05■□□□□ 0.48
Samm50Q8BGH2 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.05■□□□□ 0.48
Samm50Q8BGH2 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
Samm50Q8BGH2 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.05■□□□□ 0.48
Samm50Q8BGH2 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms