Protein–RNA interactions for Protein: Q60765

Atf3, Cyclic AMP-dependent transcription factor ATF-3, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf3Q60765 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atf3Q60765 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atf3Q60765 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atf3Q60765 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Atf3Q60765 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC20.56■□□□□ 0.88
Atf3Q60765 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Atf3Q60765 Gm18018-201ENSMUST00000198273 408 ntBASIC20.56■□□□□ 0.88
Atf3Q60765 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC20.56■□□□□ 0.88
Atf3Q60765 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atf3Q60765 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atf3Q60765 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Atf3Q60765 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atf3Q60765 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Atf3Q60765 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atf3Q60765 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atf3Q60765 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Atf3Q60765 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atf3Q60765 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC20.55■□□□□ 0.88
Atf3Q60765 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atf3Q60765 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
Atf3Q60765 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atf3Q60765 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC20.55■□□□□ 0.88
Atf3Q60765 Gm15653-201ENSMUST00000119247 907 ntBASIC20.55■□□□□ 0.88
Atf3Q60765 Gm12091-201ENSMUST00000146791 830 ntBASIC20.55■□□□□ 0.88
Atf3Q60765 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Atf3Q60765 AC153962.4-201ENSMUST00000217878 242 ntBASIC20.55■□□□□ 0.88
Atf3Q60765 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atf3Q60765 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atf3Q60765 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atf3Q60765 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atf3Q60765 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atf3Q60765 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atf3Q60765 Gm6263-201ENSMUST00000120029 1342 ntBASIC20.54■□□□□ 0.88
Atf3Q60765 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC20.54■□□□□ 0.88
Atf3Q60765 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atf3Q60765 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atf3Q60765 Gm8839-201ENSMUST00000121279 1645 ntBASIC20.54■□□□□ 0.88
Atf3Q60765 Gm24543-201ENSMUST00000103867 82 ntBASIC20.54■□□□□ 0.88
Atf3Q60765 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Atf3Q60765 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Atf3Q60765 Gm13829-201ENSMUST00000119600 138 ntBASIC20.54■□□□□ 0.88
Atf3Q60765 Mir1938-201ENSMUST00000158746 100 ntBASIC20.54■□□□□ 0.88
Atf3Q60765 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC20.54■□□□□ 0.88
Atf3Q60765 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC20.54■□□□□ 0.88
Atf3Q60765 Gm9908-201ENSMUST00000211534 448 ntBASIC20.54■□□□□ 0.88
Atf3Q60765 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atf3Q60765 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Atf3Q60765 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Atf3Q60765 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atf3Q60765 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC20.54■□□□□ 0.88
Atf3Q60765 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atf3Q60765 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atf3Q60765 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.54■□□□□ 0.88
Atf3Q60765 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Atf3Q60765 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atf3Q60765 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Atf3Q60765 Gm5320-201ENSMUST00000207163 1519 ntBASIC20.53■□□□□ 0.88
Atf3Q60765 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atf3Q60765 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atf3Q60765 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atf3Q60765 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atf3Q60765 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.53■□□□□ 0.88
Atf3Q60765 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Atf3Q60765 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Atf3Q60765 Gm8597-201ENSMUST00000191525 1109 ntBASIC20.53■□□□□ 0.88
Atf3Q60765 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC20.53■□□□□ 0.88
Atf3Q60765 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC20.53■□□□□ 0.88
Atf3Q60765 Klk2-ps-201ENSMUST00000205342 571 ntBASIC20.53■□□□□ 0.88
Atf3Q60765 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atf3Q60765 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.53■□□□□ 0.88
Atf3Q60765 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atf3Q60765 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atf3Q60765 AC115863.1-201ENSMUST00000214815 1813 ntBASIC20.53■□□□□ 0.88
Atf3Q60765 Gm9115-201ENSMUST00000120192 1348 ntBASIC20.53■□□□□ 0.88
Atf3Q60765 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC20.52■□□□□ 0.88
Atf3Q60765 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.52■□□□□ 0.88
Atf3Q60765 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atf3Q60765 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atf3Q60765 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Atf3Q60765 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Atf3Q60765 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atf3Q60765 Shd-206ENSMUST00000225145 998 ntBASIC20.52■□□□□ 0.88
Atf3Q60765 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atf3Q60765 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Atf3Q60765 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atf3Q60765 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Atf3Q60765 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atf3Q60765 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atf3Q60765 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Atf3Q60765 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Atf3Q60765 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Atf3Q60765 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Atf3Q60765 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atf3Q60765 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atf3Q60765 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC20.51■□□□□ 0.87
Atf3Q60765 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atf3Q60765 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atf3Q60765 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Atf3Q60765 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Atf3Q60765 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms