Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Scn2bQ56A07 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn2bQ56A07 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Scn2bQ56A07 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Scn2bQ56A07 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn2bQ56A07 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.26■□□□□ 0.03
Scn2bQ56A07 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Scn2bQ56A07 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn2bQ56A07 Rprl3-201ENSMUST00000157400 290 ntBASIC15.26■□□□□ 0.03
Scn2bQ56A07 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Scn2bQ56A07 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.26■□□□□ 0.03
Scn2bQ56A07 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Scn2bQ56A07 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn2bQ56A07 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn2bQ56A07 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Scn2bQ56A07 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn2bQ56A07 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn2bQ56A07 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn2bQ56A07 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn2bQ56A07 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn2bQ56A07 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn2bQ56A07 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn2bQ56A07 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Scn2bQ56A07 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn2bQ56A07 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Scn2bQ56A07 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Scn2bQ56A07 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn2bQ56A07 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.25■□□□□ 0.03
Scn2bQ56A07 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn2bQ56A07 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn2bQ56A07 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn2bQ56A07 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn2bQ56A07 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn2bQ56A07 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.25■□□□□ 0.03
Scn2bQ56A07 Gm13312-201ENSMUST00000119631 718 ntBASIC15.25■□□□□ 0.03
Scn2bQ56A07 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Scn2bQ56A07 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn2bQ56A07 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Scn2bQ56A07 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Scn2bQ56A07 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn2bQ56A07 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.25■□□□□ 0.03
Scn2bQ56A07 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn2bQ56A07 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn2bQ56A07 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn2bQ56A07 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Scn2bQ56A07 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn2bQ56A07 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Scn2bQ56A07 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn2bQ56A07 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn2bQ56A07 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn2bQ56A07 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn2bQ56A07 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn2bQ56A07 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Scn2bQ56A07 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Scn2bQ56A07 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn2bQ56A07 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Scn2bQ56A07 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn2bQ56A07 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn2bQ56A07 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn2bQ56A07 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn2bQ56A07 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn2bQ56A07 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Scn2bQ56A07 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Scn2bQ56A07 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.24■□□□□ 0.03
Scn2bQ56A07 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Scn2bQ56A07 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn2bQ56A07 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.24■□□□□ 0.03
Scn2bQ56A07 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.24■□□□□ 0.03
Scn2bQ56A07 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Scn2bQ56A07 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Scn2bQ56A07 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.24■□□□□ 0.03
Scn2bQ56A07 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.24■□□□□ 0.03
Scn2bQ56A07 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.24■□□□□ 0.03
Scn2bQ56A07 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Scn2bQ56A07 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.24■□□□□ 0.03
Scn2bQ56A07 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.24■□□□□ 0.03
Scn2bQ56A07 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Scn2bQ56A07 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn2bQ56A07 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn2bQ56A07 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn2bQ56A07 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn2bQ56A07 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn2bQ56A07 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.24■□□□□ 0.03
Scn2bQ56A07 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Scn2bQ56A07 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn2bQ56A07 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.23■□□□□ 0.03
Scn2bQ56A07 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Scn2bQ56A07 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn2bQ56A07 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn2bQ56A07 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn2bQ56A07 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn2bQ56A07 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Scn2bQ56A07 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Scn2bQ56A07 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn2bQ56A07 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn2bQ56A07 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn2bQ56A07 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn2bQ56A07 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.23■□□□□ 0.03
Scn2bQ56A07 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Scn2bQ56A07 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms