Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Tpm1P58771 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tpm1P58771 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tpm1P58771 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tpm1P58771 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.24■□□□□ 0.35
Tpm1P58771 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tpm1P58771 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tpm1P58771 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Tpm1P58771 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tpm1P58771 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tpm1P58771 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tpm1P58771 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tpm1P58771 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Tpm1P58771 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Tpm1P58771 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tpm1P58771 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tpm1P58771 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tpm1P58771 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tpm1P58771 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Tpm1P58771 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC17.23■□□□□ 0.35
Tpm1P58771 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tpm1P58771 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.23■□□□□ 0.35
Tpm1P58771 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tpm1P58771 Gm6257-201ENSMUST00000163864 910 ntBASIC17.23■□□□□ 0.35
Tpm1P58771 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tpm1P58771 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.23■□□□□ 0.35
Tpm1P58771 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tpm1P58771 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tpm1P58771 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tpm1P58771 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tpm1P58771 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tpm1P58771 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tpm1P58771 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tpm1P58771 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tpm1P58771 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tpm1P58771 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tpm1P58771 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tpm1P58771 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Tpm1P58771 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tpm1P58771 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tpm1P58771 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tpm1P58771 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Tpm1P58771 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tpm1P58771 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Tpm1P58771 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Tpm1P58771 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.22■□□□□ 0.35
Tpm1P58771 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tpm1P58771 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tpm1P58771 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tpm1P58771 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tpm1P58771 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.22■□□□□ 0.35
Tpm1P58771 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.22■□□□□ 0.35
Tpm1P58771 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Tpm1P58771 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tpm1P58771 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tpm1P58771 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tpm1P58771 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC17.22■□□□□ 0.35
Tpm1P58771 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tpm1P58771 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tpm1P58771 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tpm1P58771 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tpm1P58771 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tpm1P58771 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tpm1P58771 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tpm1P58771 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Tpm1P58771 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Tpm1P58771 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Tpm1P58771 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.21■□□□□ 0.35
Tpm1P58771 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tpm1P58771 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tpm1P58771 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tpm1P58771 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tpm1P58771 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.21■□□□□ 0.35
Tpm1P58771 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Tpm1P58771 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tpm1P58771 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Tpm1P58771 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Tpm1P58771 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tpm1P58771 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.21■□□□□ 0.35
Tpm1P58771 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Tpm1P58771 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Tpm1P58771 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Tpm1P58771 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Tpm1P58771 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tpm1P58771 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tpm1P58771 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tpm1P58771 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tpm1P58771 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Tpm1P58771 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tpm1P58771 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC17.2■□□□□ 0.34
Tpm1P58771 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tpm1P58771 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Tpm1P58771 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tpm1P58771 Gm37055-201ENSMUST00000191866 133 ntBASIC17.2■□□□□ 0.34
Tpm1P58771 Gm37722-201ENSMUST00000193757 208 ntBASIC17.2■□□□□ 0.34
Tpm1P58771 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.2■□□□□ 0.34
Tpm1P58771 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tpm1P58771 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Tpm1P58771 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tpm1P58771 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms