Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
CLDN6P56747 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.55■□□□□ 0.4
CLDN6P56747 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN6P56747 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CLDN6P56747 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN6P56747 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.55■□□□□ 0.4
CLDN6P56747 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
CLDN6P56747 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.55■□□□□ 0.4
CLDN6P56747 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.55■□□□□ 0.4
CLDN6P56747 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.55■□□□□ 0.4
CLDN6P56747 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.55■□□□□ 0.4
CLDN6P56747 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.55■□□□□ 0.4
CLDN6P56747 AC005336.2-201ENST00000593183 939 ntBASIC17.55■□□□□ 0.4
CLDN6P56747 MTDHP3-201ENST00000594186 672 ntBASIC17.55■□□□□ 0.4
CLDN6P56747 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN6P56747 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.55■□□□□ 0.4
CLDN6P56747 AP001269.4-201ENST00000609611 512 ntBASIC17.55■□□□□ 0.4
CLDN6P56747 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.55■□□□□ 0.4
CLDN6P56747 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.55■□□□□ 0.4
CLDN6P56747 AL691403.2-201ENST00000618460 490 ntBASIC17.55■□□□□ 0.4
CLDN6P56747 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN6P56747 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN6P56747 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.55■□□□□ 0.4
CLDN6P56747 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN6P56747 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.55■□□□□ 0.4
CLDN6P56747 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.55■□□□□ 0.4
CLDN6P56747 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN6P56747 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN6P56747 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN6P56747 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.55■□□□□ 0.4
CLDN6P56747 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN6P56747 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN6P56747 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN6P56747 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN6P56747 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.55■□□□□ 0.4
CLDN6P56747 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN6P56747 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN6P56747 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.54■□□□□ 0.4
CLDN6P56747 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.54■□□□□ 0.4
CLDN6P56747 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CLDN6P56747 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN6P56747 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CLDN6P56747 FAM220CP-201ENST00000395253 831 ntBASIC17.54■□□□□ 0.4
CLDN6P56747 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
CLDN6P56747 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.54■□□□□ 0.4
CLDN6P56747 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.54■□□□□ 0.4
CLDN6P56747 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.54■□□□□ 0.4
CLDN6P56747 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.54■□□□□ 0.4
CLDN6P56747 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.54■□□□□ 0.4
CLDN6P56747 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.54■□□□□ 0.4
CLDN6P56747 AL355877.3-201ENST00000622820 899 ntBASIC17.54■□□□□ 0.4
CLDN6P56747 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN6P56747 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN6P56747 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CLDN6P56747 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN6P56747 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN6P56747 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN6P56747 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN6P56747 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN6P56747 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.54■□□□□ 0.4
CLDN6P56747 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN6P56747 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.53■□□□□ 0.4
CLDN6P56747 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN6P56747 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN6P56747 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN6P56747 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN6P56747 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN6P56747 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.53■□□□□ 0.4
CLDN6P56747 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN6P56747 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN6P56747 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.53■□□□□ 0.4
CLDN6P56747 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN6P56747 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN6P56747 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN6P56747 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN6P56747 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CLDN6P56747 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
CLDN6P56747 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN6P56747 AC005104.2-201ENST00000427818 678 ntBASIC17.53■□□□□ 0.4
CLDN6P56747 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN6P56747 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN6P56747 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.53■□□□□ 0.4
CLDN6P56747 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CLDN6P56747 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN6P56747 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN6P56747 AC104109.2-201ENST00000602919 1418 ntBASIC17.53■□□□□ 0.4
CLDN6P56747 AL158211.5-201ENST00000623583 2518 ntBASIC17.53■□□□□ 0.4
CLDN6P56747 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN6P56747 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.53■□□□□ 0.4
CLDN6P56747 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN6P56747 ZNF259P1-201ENST00000407656 1365 ntBASIC17.53■□□□□ 0.4
CLDN6P56747 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.53■□□□□ 0.4
CLDN6P56747 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.53■□□□□ 0.4
CLDN6P56747 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN6P56747 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.52■□□□□ 0.4
CLDN6P56747 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN6P56747 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN6P56747 KRT89P-201ENST00000620027 1478 ntBASIC17.52■□□□□ 0.4
CLDN6P56747 TP73-AS1-210ENST00000637775 1455 ntBASIC17.52■□□□□ 0.4
CLDN6P56747 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms