Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GRIA1P42261 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
GRIA1P42261 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
GRIA1P42261 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
GRIA1P42261 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.57■□□□□ 0.56
GRIA1P42261 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GRIA1P42261 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
GRIA1P42261 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GRIA1P42261 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.57■□□□□ 0.56
GRIA1P42261 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GRIA1P42261 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.57■□□□□ 0.56
GRIA1P42261 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
GRIA1P42261 MMP23A-201ENST00000234610 1017 ntBASIC18.57■□□□□ 0.56
GRIA1P42261 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.57■□□□□ 0.56
GRIA1P42261 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.57■□□□□ 0.56
GRIA1P42261 ECEL1P2-202ENST00000465689 757 ntBASIC18.57■□□□□ 0.56
GRIA1P42261 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
GRIA1P42261 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.57■□□□□ 0.56
GRIA1P42261 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.57■□□□□ 0.56
GRIA1P42261 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
GRIA1P42261 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.57■□□□□ 0.56
GRIA1P42261 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
GRIA1P42261 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
GRIA1P42261 AC112497.1-201ENST00000624824 639 ntBASIC18.57■□□□□ 0.56
GRIA1P42261 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.57■□□□□ 0.56
GRIA1P42261 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
GRIA1P42261 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GRIA1P42261 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.57■□□□□ 0.56
GRIA1P42261 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GRIA1P42261 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GRIA1P42261 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
GRIA1P42261 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
GRIA1P42261 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GRIA1P42261 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
GRIA1P42261 KRT8P7-201ENST00000533003 1432 ntBASIC18.57■□□□□ 0.56
GRIA1P42261 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GRIA1P42261 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
GRIA1P42261 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GRIA1P42261 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
GRIA1P42261 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GRIA1P42261 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.56■□□□□ 0.56
GRIA1P42261 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
GRIA1P42261 AC104390.1-201ENST00000555663 520 ntBASIC18.56■□□□□ 0.56
GRIA1P42261 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
GRIA1P42261 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.56■□□□□ 0.56
GRIA1P42261 FAM87A-204ENST00000613235 858 ntBASIC18.56■□□□□ 0.56
GRIA1P42261 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GRIA1P42261 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
GRIA1P42261 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GRIA1P42261 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
GRIA1P42261 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
GRIA1P42261 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.55■□□□□ 0.56
GRIA1P42261 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GRIA1P42261 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
GRIA1P42261 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
GRIA1P42261 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
GRIA1P42261 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
GRIA1P42261 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
GRIA1P42261 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GRIA1P42261 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GRIA1P42261 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
GRIA1P42261 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GRIA1P42261 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
GRIA1P42261 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.55■□□□□ 0.56
GRIA1P42261 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
GRIA1P42261 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
GRIA1P42261 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
GRIA1P42261 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
GRIA1P42261 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.55■□□□□ 0.56
GRIA1P42261 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
GRIA1P42261 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.55■□□□□ 0.56
GRIA1P42261 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.55■□□□□ 0.56
GRIA1P42261 NAPSB-206ENST00000562112 1266 ntBASIC18.55■□□□□ 0.56
GRIA1P42261 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.55■□□□□ 0.56
GRIA1P42261 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.55■□□□□ 0.56
GRIA1P42261 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GRIA1P42261 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
GRIA1P42261 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
GRIA1P42261 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GRIA1P42261 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.55■□□□□ 0.56
GRIA1P42261 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GRIA1P42261 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.55■□□□□ 0.56
GRIA1P42261 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GRIA1P42261 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GRIA1P42261 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GRIA1P42261 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.54■□□□□ 0.56
GRIA1P42261 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
GRIA1P42261 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
GRIA1P42261 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GRIA1P42261 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.54■□□□□ 0.56
GRIA1P42261 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GRIA1P42261 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GRIA1P42261 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
GRIA1P42261 AC093827.2-201ENST00000512654 315 ntBASIC18.54■□□□□ 0.56
GRIA1P42261 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
GRIA1P42261 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.54■□□□□ 0.56
GRIA1P42261 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.54■□□□□ 0.56
GRIA1P42261 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.54■□□□□ 0.56
GRIA1P42261 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.54■□□□□ 0.56
GRIA1P42261 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms