Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxc6P10629 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxc6P10629 Gm6973-201ENSMUST00000117080 721 ntBASIC17.08■□□□□ 0.32
Hoxc6P10629 Gm12428-201ENSMUST00000119844 727 ntBASIC17.08■□□□□ 0.32
Hoxc6P10629 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC17.08■□□□□ 0.32
Hoxc6P10629 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxc6P10629 Mir6977-201ENSMUST00000184960 64 ntBASIC17.08■□□□□ 0.32
Hoxc6P10629 Gm5779-201ENSMUST00000218467 910 ntBASIC17.08■□□□□ 0.32
Hoxc6P10629 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.08■□□□□ 0.32
Hoxc6P10629 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxc6P10629 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxc6P10629 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxc6P10629 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
Hoxc6P10629 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Hoxc6P10629 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxc6P10629 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Hoxc6P10629 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxc6P10629 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxc6P10629 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxc6P10629 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxc6P10629 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxc6P10629 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Hoxc6P10629 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxc6P10629 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.07■□□□□ 0.32
Hoxc6P10629 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxc6P10629 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Hoxc6P10629 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC17.07■□□□□ 0.32
Hoxc6P10629 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxc6P10629 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC17.07■□□□□ 0.32
Hoxc6P10629 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Hoxc6P10629 Gm27437-201ENSMUST00000183429 107 ntBASIC17.07■□□□□ 0.32
Hoxc6P10629 Gm27306-201ENSMUST00000183970 107 ntBASIC17.07■□□□□ 0.32
Hoxc6P10629 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxc6P10629 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC17.07■□□□□ 0.32
Hoxc6P10629 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.07■□□□□ 0.32
Hoxc6P10629 AC166341.4-201ENSMUST00000220625 123 ntBASIC17.07■□□□□ 0.32
Hoxc6P10629 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxc6P10629 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxc6P10629 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxc6P10629 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxc6P10629 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxc6P10629 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxc6P10629 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxc6P10629 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxc6P10629 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxc6P10629 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxc6P10629 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxc6P10629 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxc6P10629 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxc6P10629 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxc6P10629 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Hoxc6P10629 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxc6P10629 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxc6P10629 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxc6P10629 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxc6P10629 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC17.06■□□□□ 0.32
Hoxc6P10629 Gm23547-201ENSMUST00000158210 271 ntBASIC17.06■□□□□ 0.32
Hoxc6P10629 Gm18737-201ENSMUST00000173594 937 ntBASIC17.06■□□□□ 0.32
Hoxc6P10629 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxc6P10629 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxc6P10629 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Hoxc6P10629 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.06■□□□□ 0.32
Hoxc6P10629 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxc6P10629 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxc6P10629 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxc6P10629 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxc6P10629 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxc6P10629 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxc6P10629 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxc6P10629 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.05■□□□□ 0.32
Hoxc6P10629 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxc6P10629 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Hoxc6P10629 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxc6P10629 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Hoxc6P10629 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Hoxc6P10629 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxc6P10629 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxc6P10629 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxc6P10629 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxc6P10629 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxc6P10629 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxc6P10629 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxc6P10629 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxc6P10629 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.05■□□□□ 0.32
Hoxc6P10629 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxc6P10629 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Hoxc6P10629 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxc6P10629 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxc6P10629 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxc6P10629 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxc6P10629 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxc6P10629 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.04■□□□□ 0.32
Hoxc6P10629 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxc6P10629 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxc6P10629 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC17.04■□□□□ 0.32
Hoxc6P10629 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC17.04■□□□□ 0.32
Hoxc6P10629 Gm13223-201ENSMUST00000118609 747 ntBASIC17.04■□□□□ 0.32
Hoxc6P10629 Gm2810-201ENSMUST00000118681 990 ntBASIC17.04■□□□□ 0.32
Hoxc6P10629 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxc6P10629 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms