Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Gm9063-201ENSMUST00000223299 582 ntBASIC16.76■□□□□ 0.27
Slc6a20bO88575 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc6a20bO88575 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc6a20bO88575 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc6a20bO88575 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc6a20bO88575 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Slc6a20bO88575 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Slc6a20bO88575 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Slc6a20bO88575 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc6a20bO88575 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc6a20bO88575 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc6a20bO88575 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc6a20bO88575 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Slc6a20bO88575 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc6a20bO88575 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc6a20bO88575 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.75■□□□□ 0.27
Slc6a20bO88575 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc6a20bO88575 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Slc6a20bO88575 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Slc6a20bO88575 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc6a20bO88575 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc6a20bO88575 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc6a20bO88575 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc6a20bO88575 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc6a20bO88575 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc6a20bO88575 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC16.75■□□□□ 0.27
Slc6a20bO88575 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC16.75■□□□□ 0.27
Slc6a20bO88575 Gm13015-201ENSMUST00000118674 204 ntBASIC16.75■□□□□ 0.27
Slc6a20bO88575 Gm25144-201ENSMUST00000179561 110 ntBASIC16.75■□□□□ 0.27
Slc6a20bO88575 Gm25352-201ENSMUST00000179815 110 ntBASIC16.75■□□□□ 0.27
Slc6a20bO88575 Gm28630-201ENSMUST00000187806 498 ntBASIC16.75■□□□□ 0.27
Slc6a20bO88575 Gm18187-201ENSMUST00000196476 984 ntBASIC16.75■□□□□ 0.27
Slc6a20bO88575 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC16.75■□□□□ 0.27
Slc6a20bO88575 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC16.75■□□□□ 0.27
Slc6a20bO88575 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc6a20bO88575 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC16.75■□□□□ 0.27
Slc6a20bO88575 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Slc6a20bO88575 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.75■□□□□ 0.27
Slc6a20bO88575 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Slc6a20bO88575 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.75■□□□□ 0.27
Slc6a20bO88575 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc6a20bO88575 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc6a20bO88575 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Slc6a20bO88575 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc6a20bO88575 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Slc6a20bO88575 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc6a20bO88575 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc6a20bO88575 Syt7-204ENSMUST00000223586 1344 ntBASIC16.74■□□□□ 0.27
Slc6a20bO88575 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Slc6a20bO88575 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc6a20bO88575 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.74■□□□□ 0.27
Slc6a20bO88575 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc6a20bO88575 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.74■□□□□ 0.27
Slc6a20bO88575 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc6a20bO88575 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc6a20bO88575 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC16.74■□□□□ 0.27
Slc6a20bO88575 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC16.74■□□□□ 0.27
Slc6a20bO88575 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC16.74■□□□□ 0.27
Slc6a20bO88575 Gm16026-204ENSMUST00000162652 683 ntBASIC16.74■□□□□ 0.27
Slc6a20bO88575 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc6a20bO88575 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC16.74■□□□□ 0.27
Slc6a20bO88575 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Slc6a20bO88575 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC16.74■□□□□ 0.27
Slc6a20bO88575 AC124732.1-201ENSMUST00000221551 910 ntBASIC16.74■□□□□ 0.27
Slc6a20bO88575 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Slc6a20bO88575 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc6a20bO88575 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Slc6a20bO88575 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Slc6a20bO88575 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Slc6a20bO88575 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Slc6a20bO88575 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc6a20bO88575 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc6a20bO88575 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc6a20bO88575 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc6a20bO88575 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Slc6a20bO88575 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc6a20bO88575 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc6a20bO88575 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.73■□□□□ 0.27
Slc6a20bO88575 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.73■□□□□ 0.27
Slc6a20bO88575 Gm15483-201ENSMUST00000120338 456 ntBASIC16.73■□□□□ 0.27
Slc6a20bO88575 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Slc6a20bO88575 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC16.73■□□□□ 0.27
Slc6a20bO88575 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Slc6a20bO88575 AC130829.1-201ENSMUST00000221548 494 ntBASIC16.73■□□□□ 0.27
Slc6a20bO88575 AC132863.2-201ENSMUST00000226643 799 ntBASIC16.73■□□□□ 0.27
Slc6a20bO88575 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc6a20bO88575 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.73■□□□□ 0.27
Slc6a20bO88575 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Slc6a20bO88575 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.73■□□□□ 0.27
Slc6a20bO88575 Gm15222-202ENSMUST00000228667 1726 ntBASIC16.73■□□□□ 0.27
Slc6a20bO88575 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc6a20bO88575 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Slc6a20bO88575 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc6a20bO88575 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc6a20bO88575 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc6a20bO88575 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Slc6a20bO88575 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC16.72■□□□□ 0.27
Slc6a20bO88575 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Slc6a20bO88575 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc6a20bO88575 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms