Protein–RNA interactions for Protein: O70237

Gfi1b, Zinc finger protein Gfi-1b, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfi1bO70237 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Gfi1bO70237 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.92□□□□□ -0.34
Gfi1bO70237 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gfi1bO70237 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Gfi1bO70237 AC154855.1-201ENSMUST00000227353 1458 ntBASIC12.92□□□□□ -0.34
Gfi1bO70237 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gfi1bO70237 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Gfi1bO70237 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Gfi1bO70237 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Gfi1bO70237 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gfi1bO70237 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.92□□□□□ -0.34
Gfi1bO70237 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gfi1bO70237 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gfi1bO70237 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Gfi1bO70237 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.92□□□□□ -0.34
Gfi1bO70237 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gfi1bO70237 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC12.92□□□□□ -0.34
Gfi1bO70237 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Gfi1bO70237 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.92□□□□□ -0.34
Gfi1bO70237 Gm7213-201ENSMUST00000215977 950 ntBASIC12.92□□□□□ -0.34
Gfi1bO70237 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Gfi1bO70237 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Gfi1bO70237 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gfi1bO70237 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Gfi1bO70237 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gfi1bO70237 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Gfi1bO70237 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gfi1bO70237 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gfi1bO70237 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.92□□□□□ -0.34
Gfi1bO70237 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gfi1bO70237 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Gfi1bO70237 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gfi1bO70237 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Gfi1bO70237 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gfi1bO70237 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gfi1bO70237 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gfi1bO70237 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Gfi1bO70237 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gfi1bO70237 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gfi1bO70237 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gfi1bO70237 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gfi1bO70237 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gfi1bO70237 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gfi1bO70237 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gfi1bO70237 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gfi1bO70237 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gfi1bO70237 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gfi1bO70237 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gfi1bO70237 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Gfi1bO70237 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC12.91□□□□□ -0.34
Gfi1bO70237 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gfi1bO70237 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gfi1bO70237 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.91□□□□□ -0.34
Gfi1bO70237 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Gfi1bO70237 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gfi1bO70237 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gfi1bO70237 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gfi1bO70237 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Gfi1bO70237 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gfi1bO70237 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gfi1bO70237 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gfi1bO70237 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gfi1bO70237 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gfi1bO70237 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gfi1bO70237 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gfi1bO70237 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gfi1bO70237 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gfi1bO70237 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Gfi1bO70237 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.91□□□□□ -0.34
Gfi1bO70237 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gfi1bO70237 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gfi1bO70237 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gfi1bO70237 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gfi1bO70237 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.9□□□□□ -0.34
Gfi1bO70237 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gfi1bO70237 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gfi1bO70237 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gfi1bO70237 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Gfi1bO70237 Actl10-202ENSMUST00000226583 1501 ntBASIC12.9□□□□□ -0.34
Gfi1bO70237 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gfi1bO70237 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gfi1bO70237 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gfi1bO70237 Mir1668-201ENSMUST00000184114 107 ntBASIC12.9□□□□□ -0.34
Gfi1bO70237 Gm18101-201ENSMUST00000215769 548 ntBASIC12.9□□□□□ -0.34
Gfi1bO70237 Gm18032-201ENSMUST00000222541 538 ntBASIC12.9□□□□□ -0.34
Gfi1bO70237 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gfi1bO70237 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gfi1bO70237 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gfi1bO70237 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Gfi1bO70237 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gfi1bO70237 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.9□□□□□ -0.34
Gfi1bO70237 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gfi1bO70237 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gfi1bO70237 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.9□□□□□ -0.34
Gfi1bO70237 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gfi1bO70237 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gfi1bO70237 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gfi1bO70237 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gfi1bO70237 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gfi1bO70237 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms