Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.59■□□□□ 0.57
TBC1D3BA6NDS4 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.59■□□□□ 0.57
TBC1D3BA6NDS4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TBC1D3BA6NDS4 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
TBC1D3BA6NDS4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TBC1D3BA6NDS4 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
TBC1D3BA6NDS4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
TBC1D3BA6NDS4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
TBC1D3BA6NDS4 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
TBC1D3BA6NDS4 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.58■□□□□ 0.57
TBC1D3BA6NDS4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
TBC1D3BA6NDS4 SDHAP2-201ENST00000455183 2001 ntBASIC18.58■□□□□ 0.56
TBC1D3BA6NDS4 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TBC1D3BA6NDS4 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TBC1D3BA6NDS4 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TBC1D3BA6NDS4 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TBC1D3BA6NDS4 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
TBC1D3BA6NDS4 POM121L3P-201ENST00000419331 1163 ntBASIC18.58■□□□□ 0.56
TBC1D3BA6NDS4 TSPY12P-201ENST00000421279 868 ntBASIC18.58■□□□□ 0.56
TBC1D3BA6NDS4 AC113404.2-201ENST00000507884 177 ntBASIC18.58■□□□□ 0.56
TBC1D3BA6NDS4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TBC1D3BA6NDS4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
TBC1D3BA6NDS4 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
TBC1D3BA6NDS4 AL121912.1-201ENST00000603683 238 ntBASIC18.58■□□□□ 0.56
TBC1D3BA6NDS4 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
TBC1D3BA6NDS4 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.58■□□□□ 0.56
TBC1D3BA6NDS4 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TBC1D3BA6NDS4 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.58■□□□□ 0.56
TBC1D3BA6NDS4 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TBC1D3BA6NDS4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TBC1D3BA6NDS4 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TBC1D3BA6NDS4 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.58■□□□□ 0.56
TBC1D3BA6NDS4 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TBC1D3BA6NDS4 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TBC1D3BA6NDS4 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.57■□□□□ 0.56
TBC1D3BA6NDS4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3BA6NDS4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3BA6NDS4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3BA6NDS4 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3BA6NDS4 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3BA6NDS4 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.57■□□□□ 0.56
TBC1D3BA6NDS4 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3BA6NDS4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.57■□□□□ 0.56
TBC1D3BA6NDS4 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.57■□□□□ 0.56
TBC1D3BA6NDS4 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.57■□□□□ 0.56
TBC1D3BA6NDS4 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3BA6NDS4 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3BA6NDS4 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3BA6NDS4 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.57■□□□□ 0.56
TBC1D3BA6NDS4 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.57■□□□□ 0.56
TBC1D3BA6NDS4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3BA6NDS4 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.57■□□□□ 0.56
TBC1D3BA6NDS4 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3BA6NDS4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3BA6NDS4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TBC1D3BA6NDS4 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3BA6NDS4 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.57■□□□□ 0.56
TBC1D3BA6NDS4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3BA6NDS4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TBC1D3BA6NDS4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.56■□□□□ 0.56
TBC1D3BA6NDS4 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TBC1D3BA6NDS4 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.56■□□□□ 0.56
TBC1D3BA6NDS4 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.56■□□□□ 0.56
TBC1D3BA6NDS4 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TBC1D3BA6NDS4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TBC1D3BA6NDS4 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.56■□□□□ 0.56
TBC1D3BA6NDS4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.56■□□□□ 0.56
TBC1D3BA6NDS4 AP002469.2-201ENST00000531724 424 ntBASIC18.56■□□□□ 0.56
TBC1D3BA6NDS4 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
TBC1D3BA6NDS4 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.56■□□□□ 0.56
TBC1D3BA6NDS4 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TBC1D3BA6NDS4 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TBC1D3BA6NDS4 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TBC1D3BA6NDS4 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TBC1D3BA6NDS4 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.56■□□□□ 0.56
TBC1D3BA6NDS4 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TBC1D3BA6NDS4 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TBC1D3BA6NDS4 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TBC1D3BA6NDS4 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TBC1D3BA6NDS4 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TBC1D3BA6NDS4 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TBC1D3BA6NDS4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TBC1D3BA6NDS4 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TBC1D3BA6NDS4 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TBC1D3BA6NDS4 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TBC1D3BA6NDS4 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
TBC1D3BA6NDS4 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TBC1D3BA6NDS4 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.55■□□□□ 0.56
TBC1D3BA6NDS4 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.55■□□□□ 0.56
TBC1D3BA6NDS4 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.55■□□□□ 0.56
TBC1D3BA6NDS4 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TBC1D3BA6NDS4 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.55■□□□□ 0.56
TBC1D3BA6NDS4 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TBC1D3BA6NDS4 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.55■□□□□ 0.56
TBC1D3BA6NDS4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.55■□□□□ 0.56
TBC1D3BA6NDS4 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TBC1D3BA6NDS4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TBC1D3BA6NDS4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TBC1D3BA6NDS4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TBC1D3BA6NDS4 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms