Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Col6a4A2AX52 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Col6a4A2AX52 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC12.99□□□□□ -0.33
Col6a4A2AX52 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a4A2AX52 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a4A2AX52 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a4A2AX52 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a4A2AX52 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a4A2AX52 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a4A2AX52 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a4A2AX52 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a4A2AX52 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a4A2AX52 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a4A2AX52 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a4A2AX52 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.99□□□□□ -0.33
Col6a4A2AX52 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.99□□□□□ -0.33
Col6a4A2AX52 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.99□□□□□ -0.33
Col6a4A2AX52 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a4A2AX52 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a4A2AX52 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Col6a4A2AX52 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.99□□□□□ -0.33
Col6a4A2AX52 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a4A2AX52 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a4A2AX52 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a4A2AX52 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Col6a4A2AX52 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a4A2AX52 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a4A2AX52 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a4A2AX52 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a4A2AX52 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a4A2AX52 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.99□□□□□ -0.33
Col6a4A2AX52 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a4A2AX52 Gm27989-201ENSMUST00000184721 107 ntBASIC12.99□□□□□ -0.33
Col6a4A2AX52 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a4A2AX52 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a4A2AX52 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a4A2AX52 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a4A2AX52 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a4A2AX52 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a4A2AX52 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a4A2AX52 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a4A2AX52 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a4A2AX52 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a4A2AX52 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.98□□□□□ -0.33
Col6a4A2AX52 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a4A2AX52 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a4A2AX52 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Col6a4A2AX52 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a4A2AX52 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a4A2AX52 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a4A2AX52 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a4A2AX52 Gm45606-201ENSMUST00000209836 2795 ntBASIC12.98□□□□□ -0.33
Col6a4A2AX52 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Col6a4A2AX52 Gm27618-201ENSMUST00000183671 60 ntBASIC12.98□□□□□ -0.33
Col6a4A2AX52 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a4A2AX52 Gm19164-201ENSMUST00000210667 640 ntBASIC12.98□□□□□ -0.33
Col6a4A2AX52 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.98□□□□□ -0.33
Col6a4A2AX52 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Col6a4A2AX52 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a4A2AX52 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a4A2AX52 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a4A2AX52 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a4A2AX52 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a4A2AX52 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Col6a4A2AX52 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a4A2AX52 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.97□□□□□ -0.33
Col6a4A2AX52 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.97□□□□□ -0.33
Col6a4A2AX52 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a4A2AX52 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a4A2AX52 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a4A2AX52 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a4A2AX52 Gm43338-201ENSMUST00000198617 2223 ntBASIC12.97□□□□□ -0.33
Col6a4A2AX52 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a4A2AX52 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a4A2AX52 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a4A2AX52 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a4A2AX52 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a4A2AX52 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a4A2AX52 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.97□□□□□ -0.33
Col6a4A2AX52 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.97□□□□□ -0.33
Col6a4A2AX52 Gm6257-201ENSMUST00000163864 910 ntBASIC12.97□□□□□ -0.33
Col6a4A2AX52 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.97□□□□□ -0.33
Col6a4A2AX52 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.97□□□□□ -0.33
Col6a4A2AX52 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a4A2AX52 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.97□□□□□ -0.33
Col6a4A2AX52 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a4A2AX52 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a4A2AX52 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a4A2AX52 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a4A2AX52 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a4A2AX52 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Col6a4A2AX52 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Col6a4A2AX52 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Col6a4A2AX52 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a4A2AX52 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.96□□□□□ -0.33
Col6a4A2AX52 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.96□□□□□ -0.33
Col6a4A2AX52 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Col6a4A2AX52 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a4A2AX52 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a4A2AX52 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms