Protein–RNA interactions for Protein: A0A087WR49

Scgb2b11, ABPBG11, mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scgb2b11A0A087WR49 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Scgb2b11A0A087WR49 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Scgb2b11A0A087WR49 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scgb2b11A0A087WR49 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scgb2b11A0A087WR49 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Scgb2b11A0A087WR49 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scgb2b11A0A087WR49 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Scgb2b11A0A087WR49 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scgb2b11A0A087WR49 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Scgb2b11A0A087WR49 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scgb2b11A0A087WR49 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scgb2b11A0A087WR49 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Scgb2b11A0A087WR49 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scgb2b11A0A087WR49 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scgb2b11A0A087WR49 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Scgb2b11A0A087WR49 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Scgb2b11A0A087WR49 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.48■□□□□ 0.23
Scgb2b11A0A087WR49 Gm29518-201ENSMUST00000190858 372 ntBASIC16.48■□□□□ 0.23
Scgb2b11A0A087WR49 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.48■□□□□ 0.23
Scgb2b11A0A087WR49 Gm9172-201ENSMUST00000212092 954 ntBASIC16.48■□□□□ 0.23
Scgb2b11A0A087WR49 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scgb2b11A0A087WR49 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scgb2b11A0A087WR49 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scgb2b11A0A087WR49 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Scgb2b11A0A087WR49 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Scgb2b11A0A087WR49 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Scgb2b11A0A087WR49 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scgb2b11A0A087WR49 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
Scgb2b11A0A087WR49 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Scgb2b11A0A087WR49 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Scgb2b11A0A087WR49 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Scgb2b11A0A087WR49 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Scgb2b11A0A087WR49 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.47■□□□□ 0.23
Scgb2b11A0A087WR49 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scgb2b11A0A087WR49 Gm10231-201ENSMUST00000181584 441 ntBASIC16.47■□□□□ 0.23
Scgb2b11A0A087WR49 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scgb2b11A0A087WR49 Gm10175-202ENSMUST00000208752 441 ntBASIC16.47■□□□□ 0.23
Scgb2b11A0A087WR49 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.47■□□□□ 0.23
Scgb2b11A0A087WR49 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scgb2b11A0A087WR49 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Scgb2b11A0A087WR49 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Scgb2b11A0A087WR49 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.47■□□□□ 0.23
Scgb2b11A0A087WR49 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.47■□□□□ 0.23
Scgb2b11A0A087WR49 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scgb2b11A0A087WR49 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scgb2b11A0A087WR49 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.47■□□□□ 0.23
Scgb2b11A0A087WR49 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Scgb2b11A0A087WR49 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scgb2b11A0A087WR49 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scgb2b11A0A087WR49 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scgb2b11A0A087WR49 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.47■□□□□ 0.23
Scgb2b11A0A087WR49 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scgb2b11A0A087WR49 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scgb2b11A0A087WR49 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Scgb2b11A0A087WR49 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Scgb2b11A0A087WR49 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Scgb2b11A0A087WR49 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scgb2b11A0A087WR49 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scgb2b11A0A087WR49 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scgb2b11A0A087WR49 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Scgb2b11A0A087WR49 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scgb2b11A0A087WR49 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.46■□□□□ 0.23
Scgb2b11A0A087WR49 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.46■□□□□ 0.23
Scgb2b11A0A087WR49 Mir3081-201ENSMUST00000175305 84 ntBASIC16.46■□□□□ 0.23
Scgb2b11A0A087WR49 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.46■□□□□ 0.23
Scgb2b11A0A087WR49 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Scgb2b11A0A087WR49 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Scgb2b11A0A087WR49 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scgb2b11A0A087WR49 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.46■□□□□ 0.23
Scgb2b11A0A087WR49 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Scgb2b11A0A087WR49 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scgb2b11A0A087WR49 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.46■□□□□ 0.23
Scgb2b11A0A087WR49 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scgb2b11A0A087WR49 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Scgb2b11A0A087WR49 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.46■□□□□ 0.22
Scgb2b11A0A087WR49 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Scgb2b11A0A087WR49 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Scgb2b11A0A087WR49 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Scgb2b11A0A087WR49 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Scgb2b11A0A087WR49 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Scgb2b11A0A087WR49 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Scgb2b11A0A087WR49 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scgb2b11A0A087WR49 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scgb2b11A0A087WR49 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Scgb2b11A0A087WR49 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scgb2b11A0A087WR49 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scgb2b11A0A087WR49 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scgb2b11A0A087WR49 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Scgb2b11A0A087WR49 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Scgb2b11A0A087WR49 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Scgb2b11A0A087WR49 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scgb2b11A0A087WR49 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Scgb2b11A0A087WR49 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scgb2b11A0A087WR49 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scgb2b11A0A087WR49 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scgb2b11A0A087WR49 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scgb2b11A0A087WR49 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scgb2b11A0A087WR49 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Scgb2b11A0A087WR49 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scgb2b11A0A087WR49 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms