Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-5A0A075B6B5 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trav6-5A0A075B6B5 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-5A0A075B6B5 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-5A0A075B6B5 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trav6-5A0A075B6B5 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC11.96□□□□□ -0.49
Trav6-5A0A075B6B5 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav6-5A0A075B6B5 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC11.96□□□□□ -0.5
Trav6-5A0A075B6B5 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC11.96□□□□□ -0.5
Trav6-5A0A075B6B5 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
Trav6-5A0A075B6B5 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav6-5A0A075B6B5 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav6-5A0A075B6B5 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Trav6-5A0A075B6B5 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Trav6-5A0A075B6B5 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-5A0A075B6B5 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Trav6-5A0A075B6B5 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-5A0A075B6B5 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-5A0A075B6B5 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-5A0A075B6B5 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-5A0A075B6B5 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-5A0A075B6B5 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav6-5A0A075B6B5 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav6-5A0A075B6B5 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-5A0A075B6B5 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav6-5A0A075B6B5 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-5A0A075B6B5 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Trav6-5A0A075B6B5 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trav6-5A0A075B6B5 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-5A0A075B6B5 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-5A0A075B6B5 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav6-5A0A075B6B5 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-5A0A075B6B5 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-5A0A075B6B5 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-5A0A075B6B5 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC11.95□□□□□ -0.5
Trav6-5A0A075B6B5 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC11.95□□□□□ -0.5
Trav6-5A0A075B6B5 Gm5643-201ENSMUST00000117081 966 ntBASIC11.95□□□□□ -0.5
Trav6-5A0A075B6B5 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC11.95□□□□□ -0.5
Trav6-5A0A075B6B5 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-5A0A075B6B5 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC11.95□□□□□ -0.5
Trav6-5A0A075B6B5 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-5A0A075B6B5 AC127302.2-201ENSMUST00000215212 268 ntBASIC11.95□□□□□ -0.5
Trav6-5A0A075B6B5 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-5A0A075B6B5 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-5A0A075B6B5 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-5A0A075B6B5 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-5A0A075B6B5 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-5A0A075B6B5 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-5A0A075B6B5 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav6-5A0A075B6B5 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav6-5A0A075B6B5 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-5A0A075B6B5 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-5A0A075B6B5 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-5A0A075B6B5 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-5A0A075B6B5 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-5A0A075B6B5 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-5A0A075B6B5 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-5A0A075B6B5 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-5A0A075B6B5 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-5A0A075B6B5 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-5A0A075B6B5 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Trav6-5A0A075B6B5 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-5A0A075B6B5 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-5A0A075B6B5 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-5A0A075B6B5 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC11.94□□□□□ -0.5
Trav6-5A0A075B6B5 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav6-5A0A075B6B5 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC11.94□□□□□ -0.5
Trav6-5A0A075B6B5 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-5A0A075B6B5 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-5A0A075B6B5 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-5A0A075B6B5 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-5A0A075B6B5 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trav6-5A0A075B6B5 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-5A0A075B6B5 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-5A0A075B6B5 Prkcz2-201ENSMUST00000206136 1756 ntBASIC11.94□□□□□ -0.5
Trav6-5A0A075B6B5 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-5A0A075B6B5 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-5A0A075B6B5 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trav6-5A0A075B6B5 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-5A0A075B6B5 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-5A0A075B6B5 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-5A0A075B6B5 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-5A0A075B6B5 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-5A0A075B6B5 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-5A0A075B6B5 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-5A0A075B6B5 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-5A0A075B6B5 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav6-5A0A075B6B5 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-5A0A075B6B5 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-5A0A075B6B5 Gm9889-202ENSMUST00000206983 1577 ntBASIC11.93□□□□□ -0.5
Trav6-5A0A075B6B5 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trav6-5A0A075B6B5 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-5A0A075B6B5 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-5A0A075B6B5 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-5A0A075B6B5 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-5A0A075B6B5 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Trav6-5A0A075B6B5 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-5A0A075B6B5 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Trav6-5A0A075B6B5 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-5A0A075B6B5 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms