Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC17.81■□□□□ 0.44
Smc1bQ920F6 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Smc1bQ920F6 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smc1bQ920F6 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smc1bQ920F6 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Smc1bQ920F6 Gm37171-201ENSMUST00000192636 1185 ntBASIC17.81■□□□□ 0.44
Smc1bQ920F6 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.81■□□□□ 0.44
Smc1bQ920F6 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.81■□□□□ 0.44
Smc1bQ920F6 Gm7229-201ENSMUST00000214719 1007 ntBASIC17.81■□□□□ 0.44
Smc1bQ920F6 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.81■□□□□ 0.44
Smc1bQ920F6 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smc1bQ920F6 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Smc1bQ920F6 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smc1bQ920F6 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Smc1bQ920F6 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smc1bQ920F6 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.81■□□□□ 0.44
Smc1bQ920F6 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smc1bQ920F6 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Smc1bQ920F6 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.81■□□□□ 0.44
Smc1bQ920F6 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smc1bQ920F6 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smc1bQ920F6 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Smc1bQ920F6 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smc1bQ920F6 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Smc1bQ920F6 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.8■□□□□ 0.44
Smc1bQ920F6 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smc1bQ920F6 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smc1bQ920F6 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smc1bQ920F6 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Smc1bQ920F6 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC17.8■□□□□ 0.44
Smc1bQ920F6 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Smc1bQ920F6 Mir6956-201ENSMUST00000183598 62 ntBASIC17.8■□□□□ 0.44
Smc1bQ920F6 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smc1bQ920F6 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smc1bQ920F6 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smc1bQ920F6 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smc1bQ920F6 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Smc1bQ920F6 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Smc1bQ920F6 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smc1bQ920F6 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Smc1bQ920F6 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.8■□□□□ 0.44
Smc1bQ920F6 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smc1bQ920F6 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smc1bQ920F6 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smc1bQ920F6 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Smc1bQ920F6 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smc1bQ920F6 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.79■□□□□ 0.44
Smc1bQ920F6 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smc1bQ920F6 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smc1bQ920F6 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smc1bQ920F6 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smc1bQ920F6 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smc1bQ920F6 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.79■□□□□ 0.44
Smc1bQ920F6 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.79■□□□□ 0.44
Smc1bQ920F6 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.79■□□□□ 0.44
Smc1bQ920F6 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Smc1bQ920F6 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.79■□□□□ 0.44
Smc1bQ920F6 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Smc1bQ920F6 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Smc1bQ920F6 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smc1bQ920F6 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smc1bQ920F6 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smc1bQ920F6 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.79■□□□□ 0.44
Smc1bQ920F6 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Smc1bQ920F6 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Smc1bQ920F6 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Smc1bQ920F6 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smc1bQ920F6 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smc1bQ920F6 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Smc1bQ920F6 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smc1bQ920F6 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smc1bQ920F6 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smc1bQ920F6 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smc1bQ920F6 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smc1bQ920F6 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smc1bQ920F6 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smc1bQ920F6 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smc1bQ920F6 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smc1bQ920F6 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smc1bQ920F6 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC17.78■□□□□ 0.44
Smc1bQ920F6 AC131709.1-201ENSMUST00000224731 1180 ntBASIC17.78■□□□□ 0.44
Smc1bQ920F6 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smc1bQ920F6 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smc1bQ920F6 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Smc1bQ920F6 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smc1bQ920F6 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smc1bQ920F6 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smc1bQ920F6 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smc1bQ920F6 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Smc1bQ920F6 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smc1bQ920F6 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC17.78■□□□□ 0.44
Smc1bQ920F6 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smc1bQ920F6 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Smc1bQ920F6 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.78■□□□□ 0.44
Smc1bQ920F6 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.78■□□□□ 0.44
Smc1bQ920F6 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.77■□□□□ 0.44
Smc1bQ920F6 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.77■□□□□ 0.44
Smc1bQ920F6 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smc1bQ920F6 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smc1bQ920F6 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms