Protein–RNA interactions for Protein: Q8VHS2

Crb1, Protein crumbs homolog 1, mousemouse

Predictions only

Length 1,405 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crb1Q8VHS2 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Crb1Q8VHS2 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC19.18■□□□□ 0.66
Crb1Q8VHS2 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Crb1Q8VHS2 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Crb1Q8VHS2 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Crb1Q8VHS2 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Crb1Q8VHS2 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Crb1Q8VHS2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Crb1Q8VHS2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Crb1Q8VHS2 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Crb1Q8VHS2 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Crb1Q8VHS2 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC19.17■□□□□ 0.66
Crb1Q8VHS2 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Crb1Q8VHS2 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Crb1Q8VHS2 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Crb1Q8VHS2 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
Crb1Q8VHS2 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC19.17■□□□□ 0.66
Crb1Q8VHS2 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Crb1Q8VHS2 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Crb1Q8VHS2 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Crb1Q8VHS2 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Crb1Q8VHS2 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Crb1Q8VHS2 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Crb1Q8VHS2 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Crb1Q8VHS2 Gm14767-201ENSMUST00000121559 586 ntBASIC19.17■□□□□ 0.66
Crb1Q8VHS2 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Crb1Q8VHS2 Gm27533-201ENSMUST00000183800 152 ntBASIC19.17■□□□□ 0.66
Crb1Q8VHS2 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Crb1Q8VHS2 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC19.17■□□□□ 0.66
Crb1Q8VHS2 AC124751.1-201ENSMUST00000222716 1408 ntBASIC19.17■□□□□ 0.66
Crb1Q8VHS2 AC132863.2-201ENSMUST00000226643 799 ntBASIC19.17■□□□□ 0.66
Crb1Q8VHS2 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Crb1Q8VHS2 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Crb1Q8VHS2 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Crb1Q8VHS2 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Crb1Q8VHS2 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Crb1Q8VHS2 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Crb1Q8VHS2 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Crb1Q8VHS2 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Crb1Q8VHS2 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.16■□□□□ 0.66
Crb1Q8VHS2 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Crb1Q8VHS2 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Crb1Q8VHS2 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Crb1Q8VHS2 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Crb1Q8VHS2 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Crb1Q8VHS2 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Crb1Q8VHS2 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Crb1Q8VHS2 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Crb1Q8VHS2 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Crb1Q8VHS2 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Crb1Q8VHS2 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Crb1Q8VHS2 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Crb1Q8VHS2 Gm15593-201ENSMUST00000122085 1008 ntBASIC19.16■□□□□ 0.66
Crb1Q8VHS2 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Crb1Q8VHS2 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Crb1Q8VHS2 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Crb1Q8VHS2 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Crb1Q8VHS2 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC19.16■□□□□ 0.66
Crb1Q8VHS2 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Crb1Q8VHS2 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Crb1Q8VHS2 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Crb1Q8VHS2 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Crb1Q8VHS2 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC19.15■□□□□ 0.66
Crb1Q8VHS2 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Crb1Q8VHS2 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Crb1Q8VHS2 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC19.15■□□□□ 0.66
Crb1Q8VHS2 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Crb1Q8VHS2 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Crb1Q8VHS2 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Crb1Q8VHS2 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Crb1Q8VHS2 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Crb1Q8VHS2 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Crb1Q8VHS2 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC19.15■□□□□ 0.66
Crb1Q8VHS2 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Crb1Q8VHS2 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Crb1Q8VHS2 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC19.15■□□□□ 0.66
Crb1Q8VHS2 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Crb1Q8VHS2 Gm7730-201ENSMUST00000212486 454 ntBASIC19.15■□□□□ 0.66
Crb1Q8VHS2 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Crb1Q8VHS2 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Crb1Q8VHS2 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Crb1Q8VHS2 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Crb1Q8VHS2 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC19.15■□□□□ 0.66
Crb1Q8VHS2 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Crb1Q8VHS2 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Crb1Q8VHS2 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Crb1Q8VHS2 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Crb1Q8VHS2 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Crb1Q8VHS2 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC19.14■□□□□ 0.65
Crb1Q8VHS2 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Crb1Q8VHS2 Ighv8-7-201ENSMUST00000194349 297 ntBASIC19.14■□□□□ 0.65
Crb1Q8VHS2 Gm43438-201ENSMUST00000198133 379 ntBASIC19.14■□□□□ 0.65
Crb1Q8VHS2 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Crb1Q8VHS2 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Crb1Q8VHS2 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Crb1Q8VHS2 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Crb1Q8VHS2 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Crb1Q8VHS2 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC19.14■□□□□ 0.65
Crb1Q8VHS2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.14■□□□□ 0.65
Crb1Q8VHS2 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms