Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Cdhr3Q8BL00 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdhr3Q8BL00 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdhr3Q8BL00 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Cdhr3Q8BL00 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Cdhr3Q8BL00 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdhr3Q8BL00 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdhr3Q8BL00 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdhr3Q8BL00 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdhr3Q8BL00 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Cdhr3Q8BL00 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Cdhr3Q8BL00 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdhr3Q8BL00 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Cdhr3Q8BL00 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Cdhr3Q8BL00 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdhr3Q8BL00 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdhr3Q8BL00 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdhr3Q8BL00 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.5□□□□□ -0.25
Cdhr3Q8BL00 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdhr3Q8BL00 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdhr3Q8BL00 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.5□□□□□ -0.25
Cdhr3Q8BL00 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdhr3Q8BL00 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdhr3Q8BL00 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdhr3Q8BL00 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdhr3Q8BL00 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdhr3Q8BL00 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdhr3Q8BL00 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Cdhr3Q8BL00 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdhr3Q8BL00 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdhr3Q8BL00 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdhr3Q8BL00 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdhr3Q8BL00 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdhr3Q8BL00 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Cdhr3Q8BL00 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdhr3Q8BL00 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdhr3Q8BL00 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdhr3Q8BL00 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdhr3Q8BL00 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdhr3Q8BL00 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdhr3Q8BL00 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdhr3Q8BL00 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Cdhr3Q8BL00 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Cdhr3Q8BL00 Gm13312-201ENSMUST00000119631 718 ntBASIC13.49□□□□□ -0.25
Cdhr3Q8BL00 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdhr3Q8BL00 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC13.49□□□□□ -0.25
Cdhr3Q8BL00 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.49□□□□□ -0.25
Cdhr3Q8BL00 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.49□□□□□ -0.25
Cdhr3Q8BL00 Gm45328-201ENSMUST00000210942 917 ntBASIC13.49□□□□□ -0.25
Cdhr3Q8BL00 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdhr3Q8BL00 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdhr3Q8BL00 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.49□□□□□ -0.25
Cdhr3Q8BL00 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.49□□□□□ -0.25
Cdhr3Q8BL00 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdhr3Q8BL00 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdhr3Q8BL00 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdhr3Q8BL00 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdhr3Q8BL00 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdhr3Q8BL00 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.49□□□□□ -0.25
Cdhr3Q8BL00 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.48□□□□□ -0.25
Cdhr3Q8BL00 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdhr3Q8BL00 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Cdhr3Q8BL00 Gm8258-201ENSMUST00000055593 1449 ntBASIC13.48□□□□□ -0.25
Cdhr3Q8BL00 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdhr3Q8BL00 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Cdhr3Q8BL00 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdhr3Q8BL00 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cdhr3Q8BL00 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdhr3Q8BL00 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdhr3Q8BL00 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.48□□□□□ -0.25
Cdhr3Q8BL00 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.48□□□□□ -0.25
Cdhr3Q8BL00 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Cdhr3Q8BL00 Gm15794-201ENSMUST00000120182 631 ntBASIC13.48□□□□□ -0.25
Cdhr3Q8BL00 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Cdhr3Q8BL00 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdhr3Q8BL00 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdhr3Q8BL00 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC13.48□□□□□ -0.25
Cdhr3Q8BL00 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdhr3Q8BL00 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdhr3Q8BL00 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.48□□□□□ -0.25
Cdhr3Q8BL00 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Cdhr3Q8BL00 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdhr3Q8BL00 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdhr3Q8BL00 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Cdhr3Q8BL00 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdhr3Q8BL00 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdhr3Q8BL00 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdhr3Q8BL00 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdhr3Q8BL00 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdhr3Q8BL00 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdhr3Q8BL00 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdhr3Q8BL00 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdhr3Q8BL00 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdhr3Q8BL00 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdhr3Q8BL00 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdhr3Q8BL00 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Cdhr3Q8BL00 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Cdhr3Q8BL00 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdhr3Q8BL00 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Cdhr3Q8BL00 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms