Protein–RNA interactions for Protein: Q80TP3

Ubr5, E3 ubiquitin-protein ligase UBR5, mousemouse

Predictions only

Length 2,792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr5Q80TP3 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ubr5Q80TP3 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ubr5Q80TP3 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ubr5Q80TP3 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ubr5Q80TP3 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ubr5Q80TP3 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.18□□□□□ -0.3
Ubr5Q80TP3 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.18□□□□□ -0.3
Ubr5Q80TP3 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ubr5Q80TP3 Gm43179-201ENSMUST00000198797 275 ntBASIC13.18□□□□□ -0.3
Ubr5Q80TP3 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ubr5Q80TP3 Gm16476-201ENSMUST00000221544 139 ntBASIC13.18□□□□□ -0.3
Ubr5Q80TP3 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.18□□□□□ -0.3
Ubr5Q80TP3 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.18□□□□□ -0.3
Ubr5Q80TP3 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ubr5Q80TP3 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ubr5Q80TP3 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ubr5Q80TP3 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ubr5Q80TP3 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ubr5Q80TP3 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ubr5Q80TP3 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ubr5Q80TP3 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ubr5Q80TP3 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.18□□□□□ -0.3
Ubr5Q80TP3 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.18□□□□□ -0.3
Ubr5Q80TP3 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ubr5Q80TP3 Gm37917-201ENSMUST00000194711 392 ntBASIC13.18□□□□□ -0.3
Ubr5Q80TP3 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.18□□□□□ -0.3
Ubr5Q80TP3 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ubr5Q80TP3 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ubr5Q80TP3 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ubr5Q80TP3 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Ubr5Q80TP3 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ubr5Q80TP3 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.18□□□□□ -0.3
Ubr5Q80TP3 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.17□□□□□ -0.3
Ubr5Q80TP3 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubr5Q80TP3 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ubr5Q80TP3 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ubr5Q80TP3 Gm13392-201ENSMUST00000117708 150 ntBASIC13.17□□□□□ -0.3
Ubr5Q80TP3 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ubr5Q80TP3 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ubr5Q80TP3 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.17□□□□□ -0.3
Ubr5Q80TP3 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubr5Q80TP3 Dupd1-202ENSMUST00000224735 548 ntBASIC13.17□□□□□ -0.3
Ubr5Q80TP3 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.17□□□□□ -0.3
Ubr5Q80TP3 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ubr5Q80TP3 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubr5Q80TP3 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Ubr5Q80TP3 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubr5Q80TP3 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubr5Q80TP3 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ubr5Q80TP3 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.17□□□□□ -0.3
Ubr5Q80TP3 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Ubr5Q80TP3 Gm9002-201ENSMUST00000178437 499 ntBASIC13.17□□□□□ -0.3
Ubr5Q80TP3 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ubr5Q80TP3 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubr5Q80TP3 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubr5Q80TP3 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.17□□□□□ -0.3
Ubr5Q80TP3 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubr5Q80TP3 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubr5Q80TP3 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubr5Q80TP3 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.16□□□□□ -0.3
Ubr5Q80TP3 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubr5Q80TP3 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubr5Q80TP3 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubr5Q80TP3 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Ubr5Q80TP3 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubr5Q80TP3 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubr5Q80TP3 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Ubr5Q80TP3 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubr5Q80TP3 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubr5Q80TP3 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubr5Q80TP3 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC13.16□□□□□ -0.3
Ubr5Q80TP3 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubr5Q80TP3 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ubr5Q80TP3 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubr5Q80TP3 Gm15678-201ENSMUST00000117573 960 ntBASIC13.16□□□□□ -0.3
Ubr5Q80TP3 Gm27892-201ENSMUST00000185017 106 ntBASIC13.16□□□□□ -0.3
Ubr5Q80TP3 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.16□□□□□ -0.3
Ubr5Q80TP3 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ubr5Q80TP3 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubr5Q80TP3 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Ubr5Q80TP3 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubr5Q80TP3 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubr5Q80TP3 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubr5Q80TP3 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ubr5Q80TP3 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ubr5Q80TP3 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.15□□□□□ -0.3
Ubr5Q80TP3 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.15□□□□□ -0.3
Ubr5Q80TP3 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.15□□□□□ -0.3
Ubr5Q80TP3 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ubr5Q80TP3 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ubr5Q80TP3 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ubr5Q80TP3 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ubr5Q80TP3 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ubr5Q80TP3 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.15□□□□□ -0.3
Ubr5Q80TP3 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ubr5Q80TP3 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ubr5Q80TP3 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ubr5Q80TP3 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ubr5Q80TP3 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ubr5Q80TP3 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms