Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CCDC141Q6ZP82 SNCG-201ENST00000348795 684 ntTSL 2 BASIC27.29■■□□□ 1.96
CCDC141Q6ZP82 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
CCDC141Q6ZP82 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CCDC141Q6ZP82 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CCDC141Q6ZP82 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC27.29■■□□□ 1.96
CCDC141Q6ZP82 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC27.29■■□□□ 1.96
CCDC141Q6ZP82 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CCDC141Q6ZP82 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC27.29■■□□□ 1.96
CCDC141Q6ZP82 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC27.29■■□□□ 1.96
CCDC141Q6ZP82 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CCDC141Q6ZP82 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC27.29■■□□□ 1.96
CCDC141Q6ZP82 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
CCDC141Q6ZP82 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CCDC141Q6ZP82 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CCDC141Q6ZP82 CD63-204ENST00000546939 779 ntTSL 3 BASIC27.28■■□□□ 1.96
CCDC141Q6ZP82 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CCDC141Q6ZP82 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC27.28■■□□□ 1.96
CCDC141Q6ZP82 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC27.28■■□□□ 1.96
CCDC141Q6ZP82 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CCDC141Q6ZP82 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC27.28■■□□□ 1.96
CCDC141Q6ZP82 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CCDC141Q6ZP82 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CCDC141Q6ZP82 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
CCDC141Q6ZP82 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC27.28■■□□□ 1.96
CCDC141Q6ZP82 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
CCDC141Q6ZP82 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC27.27■■□□□ 1.96
CCDC141Q6ZP82 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CCDC141Q6ZP82 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CCDC141Q6ZP82 AC005332.7-201ENST00000614046 2005 ntBASIC27.27■■□□□ 1.96
CCDC141Q6ZP82 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
CCDC141Q6ZP82 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CCDC141Q6ZP82 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
CCDC141Q6ZP82 CTNS-203ENST00000399306 803 ntTSL 3 BASIC27.27■■□□□ 1.96
CCDC141Q6ZP82 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC27.27■■□□□ 1.96
CCDC141Q6ZP82 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC27.27■■□□□ 1.96
CCDC141Q6ZP82 COX10-202ENST00000429152 875 ntTSL 2 BASIC27.27■■□□□ 1.96
CCDC141Q6ZP82 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC27.27■■□□□ 1.96
CCDC141Q6ZP82 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CCDC141Q6ZP82 AC012640.2-201ENST00000561606 901 ntBASIC27.27■■□□□ 1.96
CCDC141Q6ZP82 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CCDC141Q6ZP82 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
CCDC141Q6ZP82 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CCDC141Q6ZP82 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC27.27■■□□□ 1.96
CCDC141Q6ZP82 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
CCDC141Q6ZP82 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC27.27■■□□□ 1.96
CCDC141Q6ZP82 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
CCDC141Q6ZP82 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
CCDC141Q6ZP82 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CCDC141Q6ZP82 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC27.26■■□□□ 1.95
CCDC141Q6ZP82 MIR1233-2-201ENST00000408138 82 ntBASIC27.26■■□□□ 1.95
CCDC141Q6ZP82 MIR1233-1-201ENST00000408722 82 ntBASIC27.26■■□□□ 1.95
CCDC141Q6ZP82 RPS2P1-201ENST00000434010 821 ntBASIC27.26■■□□□ 1.95
CCDC141Q6ZP82 AC092865.5-201ENST00000545435 363 ntBASIC27.26■■□□□ 1.95
CCDC141Q6ZP82 COX5A-204ENST00000567270 579 ntTSL 3 BASIC27.26■■□□□ 1.95
CCDC141Q6ZP82 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC27.26■■□□□ 1.95
CCDC141Q6ZP82 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
CCDC141Q6ZP82 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CCDC141Q6ZP82 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC27.26■■□□□ 1.95
CCDC141Q6ZP82 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CCDC141Q6ZP82 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CCDC141Q6ZP82 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
CCDC141Q6ZP82 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CCDC141Q6ZP82 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC27.25■■□□□ 1.95
CCDC141Q6ZP82 AC098831.1-202ENST00000438821 336 ntBASIC27.25■■□□□ 1.95
CCDC141Q6ZP82 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC27.25■■□□□ 1.95
CCDC141Q6ZP82 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC27.25■■□□□ 1.95
CCDC141Q6ZP82 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC27.25■■□□□ 1.95
CCDC141Q6ZP82 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC27.25■■□□□ 1.95
CCDC141Q6ZP82 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC27.25■■□□□ 1.95
CCDC141Q6ZP82 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC27.25■■□□□ 1.95
CCDC141Q6ZP82 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CCDC141Q6ZP82 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
CCDC141Q6ZP82 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC27.25■■□□□ 1.95
CCDC141Q6ZP82 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC27.25■■□□□ 1.95
CCDC141Q6ZP82 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CCDC141Q6ZP82 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CCDC141Q6ZP82 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
CCDC141Q6ZP82 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC27.25■■□□□ 1.95
CCDC141Q6ZP82 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CCDC141Q6ZP82 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CCDC141Q6ZP82 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
CCDC141Q6ZP82 FUOM-202ENST00000368551 628 ntTSL 3 BASIC27.25■■□□□ 1.95
CCDC141Q6ZP82 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC27.25■■□□□ 1.95
CCDC141Q6ZP82 AC112698.1-201ENST00000510299 916 ntBASIC27.25■■□□□ 1.95
CCDC141Q6ZP82 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CCDC141Q6ZP82 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CCDC141Q6ZP82 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC27.24■■□□□ 1.95
CCDC141Q6ZP82 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CCDC141Q6ZP82 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CCDC141Q6ZP82 PMS2P7-201ENST00000506558 1336 ntBASIC27.24■■□□□ 1.95
CCDC141Q6ZP82 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC27.24■■□□□ 1.95
CCDC141Q6ZP82 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CCDC141Q6ZP82 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CCDC141Q6ZP82 FABP5-202ENST00000396359 986 ntTSL 5 BASIC27.24■■□□□ 1.95
CCDC141Q6ZP82 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC27.24■■□□□ 1.95
CCDC141Q6ZP82 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC27.24■■□□□ 1.95
CCDC141Q6ZP82 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC27.24■■□□□ 1.95
CCDC141Q6ZP82 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC27.24■■□□□ 1.95
CCDC141Q6ZP82 AC034105.1-201ENST00000563488 319 ntBASIC27.24■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms