Protein–RNA interactions for Protein: Q6PDJ1

Cachd1, VWFA and cache domain-containing protein 1, mousemouse

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cachd1Q6PDJ1 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.58■□□□□ 0.08
Cachd1Q6PDJ1 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cachd1Q6PDJ1 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cachd1Q6PDJ1 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cachd1Q6PDJ1 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cachd1Q6PDJ1 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cachd1Q6PDJ1 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cachd1Q6PDJ1 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cachd1Q6PDJ1 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cachd1Q6PDJ1 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cachd1Q6PDJ1 Gm15487-201ENSMUST00000122373 465 ntBASIC15.57■□□□□ 0.08
Cachd1Q6PDJ1 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cachd1Q6PDJ1 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC15.57■□□□□ 0.08
Cachd1Q6PDJ1 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cachd1Q6PDJ1 CT009713.10-202ENSMUST00000225734 696 ntBASIC15.57■□□□□ 0.08
Cachd1Q6PDJ1 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cachd1Q6PDJ1 Gm9200-201ENSMUST00000118513 1354 ntBASIC15.57■□□□□ 0.08
Cachd1Q6PDJ1 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Cachd1Q6PDJ1 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cachd1Q6PDJ1 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.57■□□□□ 0.08
Cachd1Q6PDJ1 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cachd1Q6PDJ1 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cachd1Q6PDJ1 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
Cachd1Q6PDJ1 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cachd1Q6PDJ1 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cachd1Q6PDJ1 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cachd1Q6PDJ1 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.56■□□□□ 0.08
Cachd1Q6PDJ1 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Cachd1Q6PDJ1 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cachd1Q6PDJ1 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cachd1Q6PDJ1 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Cachd1Q6PDJ1 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.56■□□□□ 0.08
Cachd1Q6PDJ1 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cachd1Q6PDJ1 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cachd1Q6PDJ1 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cachd1Q6PDJ1 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.56■□□□□ 0.08
Cachd1Q6PDJ1 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cachd1Q6PDJ1 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Cachd1Q6PDJ1 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cachd1Q6PDJ1 Gm38294-201ENSMUST00000192831 381 ntBASIC15.56■□□□□ 0.08
Cachd1Q6PDJ1 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Cachd1Q6PDJ1 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cachd1Q6PDJ1 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cachd1Q6PDJ1 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cachd1Q6PDJ1 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Cachd1Q6PDJ1 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cachd1Q6PDJ1 Olfr582-201ENSMUST00000098212 960 ntBASIC15.56■□□□□ 0.08
Cachd1Q6PDJ1 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cachd1Q6PDJ1 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cachd1Q6PDJ1 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cachd1Q6PDJ1 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cachd1Q6PDJ1 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cachd1Q6PDJ1 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cachd1Q6PDJ1 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.56■□□□□ 0.08
Cachd1Q6PDJ1 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cachd1Q6PDJ1 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cachd1Q6PDJ1 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.56■□□□□ 0.08
Cachd1Q6PDJ1 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cachd1Q6PDJ1 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.56■□□□□ 0.08
Cachd1Q6PDJ1 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.56■□□□□ 0.08
Cachd1Q6PDJ1 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cachd1Q6PDJ1 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cachd1Q6PDJ1 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cachd1Q6PDJ1 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cachd1Q6PDJ1 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cachd1Q6PDJ1 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cachd1Q6PDJ1 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cachd1Q6PDJ1 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Cachd1Q6PDJ1 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cachd1Q6PDJ1 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cachd1Q6PDJ1 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cachd1Q6PDJ1 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cachd1Q6PDJ1 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC15.55■□□□□ 0.08
Cachd1Q6PDJ1 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cachd1Q6PDJ1 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC15.55■□□□□ 0.08
Cachd1Q6PDJ1 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cachd1Q6PDJ1 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cachd1Q6PDJ1 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cachd1Q6PDJ1 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cachd1Q6PDJ1 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cachd1Q6PDJ1 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cachd1Q6PDJ1 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cachd1Q6PDJ1 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cachd1Q6PDJ1 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cachd1Q6PDJ1 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.55■□□□□ 0.08
Cachd1Q6PDJ1 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cachd1Q6PDJ1 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Cachd1Q6PDJ1 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.54■□□□□ 0.08
Cachd1Q6PDJ1 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.54■□□□□ 0.08
Cachd1Q6PDJ1 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cachd1Q6PDJ1 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cachd1Q6PDJ1 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cachd1Q6PDJ1 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cachd1Q6PDJ1 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cachd1Q6PDJ1 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Cachd1Q6PDJ1 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.54■□□□□ 0.08
Cachd1Q6PDJ1 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cachd1Q6PDJ1 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cachd1Q6PDJ1 Gm12957-201ENSMUST00000117835 377 ntBASIC15.54■□□□□ 0.08
Cachd1Q6PDJ1 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms