Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Clcn1Q64347 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clcn1Q64347 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clcn1Q64347 Rbfox2-206ENSMUST00000227314 1810 ntBASIC19.51■□□□□ 0.71
Clcn1Q64347 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Clcn1Q64347 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clcn1Q64347 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Clcn1Q64347 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC19.51■□□□□ 0.71
Clcn1Q64347 Rpph1-201ENSMUST00000175096 319 ntBASIC19.51■□□□□ 0.71
Clcn1Q64347 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Clcn1Q64347 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC19.51■□□□□ 0.71
Clcn1Q64347 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Clcn1Q64347 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Clcn1Q64347 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC19.51■□□□□ 0.71
Clcn1Q64347 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clcn1Q64347 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clcn1Q64347 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clcn1Q64347 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Clcn1Q64347 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clcn1Q64347 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Clcn1Q64347 AC115863.1-201ENSMUST00000214815 1813 ntBASIC19.51■□□□□ 0.71
Clcn1Q64347 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
Clcn1Q64347 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clcn1Q64347 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC19.5■□□□□ 0.71
Clcn1Q64347 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Clcn1Q64347 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clcn1Q64347 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clcn1Q64347 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clcn1Q64347 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clcn1Q64347 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC19.5■□□□□ 0.71
Clcn1Q64347 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clcn1Q64347 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clcn1Q64347 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clcn1Q64347 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Clcn1Q64347 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Clcn1Q64347 Gm18889-201ENSMUST00000174284 929 ntBASIC19.5■□□□□ 0.71
Clcn1Q64347 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC19.5■□□□□ 0.71
Clcn1Q64347 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC19.5■□□□□ 0.71
Clcn1Q64347 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC19.5■□□□□ 0.71
Clcn1Q64347 Gm5628-201ENSMUST00000222318 1049 ntBASIC19.5■□□□□ 0.71
Clcn1Q64347 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clcn1Q64347 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clcn1Q64347 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Clcn1Q64347 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clcn1Q64347 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clcn1Q64347 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clcn1Q64347 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Clcn1Q64347 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clcn1Q64347 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clcn1Q64347 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clcn1Q64347 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Clcn1Q64347 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clcn1Q64347 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clcn1Q64347 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Clcn1Q64347 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
Clcn1Q64347 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Clcn1Q64347 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Clcn1Q64347 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clcn1Q64347 Gm16198-201ENSMUST00000118766 670 ntBASIC19.49■□□□□ 0.71
Clcn1Q64347 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Clcn1Q64347 AC127302.2-201ENSMUST00000215212 268 ntBASIC19.49■□□□□ 0.71
Clcn1Q64347 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clcn1Q64347 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Clcn1Q64347 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clcn1Q64347 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clcn1Q64347 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clcn1Q64347 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clcn1Q64347 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clcn1Q64347 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clcn1Q64347 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clcn1Q64347 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clcn1Q64347 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clcn1Q64347 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clcn1Q64347 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Clcn1Q64347 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Clcn1Q64347 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC19.48■□□□□ 0.71
Clcn1Q64347 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clcn1Q64347 Gpr146-202ENSMUST00000053120 1040 ntBASIC19.48■□□□□ 0.71
Clcn1Q64347 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clcn1Q64347 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clcn1Q64347 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clcn1Q64347 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Clcn1Q64347 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clcn1Q64347 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clcn1Q64347 Fgf17-202ENSMUST00000227123 1336 ntBASIC19.48■□□□□ 0.71
Clcn1Q64347 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clcn1Q64347 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clcn1Q64347 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clcn1Q64347 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clcn1Q64347 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clcn1Q64347 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clcn1Q64347 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clcn1Q64347 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Clcn1Q64347 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Clcn1Q64347 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clcn1Q64347 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clcn1Q64347 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Clcn1Q64347 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Clcn1Q64347 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clcn1Q64347 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms