Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-2Q5R1I4 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav6-2Q5R1I4 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-2Q5R1I4 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-2Q5R1I4 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-2Q5R1I4 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-2Q5R1I4 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-2Q5R1I4 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-2Q5R1I4 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-2Q5R1I4 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-2Q5R1I4 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-2Q5R1I4 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-2Q5R1I4 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-2Q5R1I4 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-2Q5R1I4 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-2Q5R1I4 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-2Q5R1I4 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trav6-2Q5R1I4 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-2Q5R1I4 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-2Q5R1I4 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.53□□□□□ -0.24
Trav6-2Q5R1I4 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-2Q5R1I4 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav6-2Q5R1I4 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trav6-2Q5R1I4 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-2Q5R1I4 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.53□□□□□ -0.24
Trav6-2Q5R1I4 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-2Q5R1I4 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-2Q5R1I4 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-2Q5R1I4 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.53□□□□□ -0.24
Trav6-2Q5R1I4 Gm10499-201ENSMUST00000174094 934 ntBASIC13.53□□□□□ -0.24
Trav6-2Q5R1I4 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-2Q5R1I4 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-2Q5R1I4 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.53□□□□□ -0.24
Trav6-2Q5R1I4 Mir6956-201ENSMUST00000183598 62 ntBASIC13.53□□□□□ -0.24
Trav6-2Q5R1I4 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-2Q5R1I4 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.53□□□□□ -0.24
Trav6-2Q5R1I4 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-2Q5R1I4 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.53□□□□□ -0.24
Trav6-2Q5R1I4 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.53□□□□□ -0.24
Trav6-2Q5R1I4 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-2Q5R1I4 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.53□□□□□ -0.24
Trav6-2Q5R1I4 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav6-2Q5R1I4 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav6-2Q5R1I4 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-2Q5R1I4 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-2Q5R1I4 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-2Q5R1I4 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-2Q5R1I4 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-2Q5R1I4 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-2Q5R1I4 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-2Q5R1I4 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Trav6-2Q5R1I4 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6-2Q5R1I4 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6-2Q5R1I4 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6-2Q5R1I4 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6-2Q5R1I4 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6-2Q5R1I4 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Trav6-2Q5R1I4 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.52□□□□□ -0.24
Trav6-2Q5R1I4 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Trav6-2Q5R1I4 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Trav6-2Q5R1I4 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6-2Q5R1I4 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-2Q5R1I4 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.52□□□□□ -0.25
Trav6-2Q5R1I4 Gm11745-201ENSMUST00000121669 448 ntBASIC13.52□□□□□ -0.25
Trav6-2Q5R1I4 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.52□□□□□ -0.25
Trav6-2Q5R1I4 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Trav6-2Q5R1I4 Gm2272-201ENSMUST00000194903 582 ntBASIC13.52□□□□□ -0.25
Trav6-2Q5R1I4 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.52□□□□□ -0.25
Trav6-2Q5R1I4 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-2Q5R1I4 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-2Q5R1I4 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trav6-2Q5R1I4 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-2Q5R1I4 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.52□□□□□ -0.25
Trav6-2Q5R1I4 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-2Q5R1I4 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-2Q5R1I4 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-2Q5R1I4 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-2Q5R1I4 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-2Q5R1I4 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-2Q5R1I4 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-2Q5R1I4 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-2Q5R1I4 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-2Q5R1I4 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-2Q5R1I4 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-2Q5R1I4 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-2Q5R1I4 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-2Q5R1I4 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-2Q5R1I4 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-2Q5R1I4 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-2Q5R1I4 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-2Q5R1I4 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-2Q5R1I4 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-2Q5R1I4 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-2Q5R1I4 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-2Q5R1I4 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-2Q5R1I4 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-2Q5R1I4 Gm13616-201ENSMUST00000120600 222 ntBASIC13.51□□□□□ -0.25
Trav6-2Q5R1I4 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-2Q5R1I4 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-2Q5R1I4 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms