Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim63Q38HM4 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trim63Q38HM4 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trim63Q38HM4 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim63Q38HM4 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim63Q38HM4 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.8□□□□□ -0.36
Trim63Q38HM4 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim63Q38HM4 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trim63Q38HM4 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim63Q38HM4 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Trim63Q38HM4 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.79□□□□□ -0.36
Trim63Q38HM4 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.79□□□□□ -0.36
Trim63Q38HM4 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim63Q38HM4 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trim63Q38HM4 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim63Q38HM4 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim63Q38HM4 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.79□□□□□ -0.36
Trim63Q38HM4 Gm12251-201ENSMUST00000117893 792 ntBASIC12.79□□□□□ -0.36
Trim63Q38HM4 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC12.79□□□□□ -0.36
Trim63Q38HM4 CT010467.1-202ENSMUST00000205406 714 ntBASIC12.79□□□□□ -0.36
Trim63Q38HM4 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim63Q38HM4 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim63Q38HM4 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim63Q38HM4 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim63Q38HM4 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim63Q38HM4 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim63Q38HM4 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim63Q38HM4 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim63Q38HM4 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim63Q38HM4 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim63Q38HM4 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim63Q38HM4 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trim63Q38HM4 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim63Q38HM4 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trim63Q38HM4 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim63Q38HM4 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim63Q38HM4 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim63Q38HM4 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim63Q38HM4 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trim63Q38HM4 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim63Q38HM4 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim63Q38HM4 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim63Q38HM4 Smad6-203ENSMUST00000179458 273 ntBASIC12.78□□□□□ -0.36
Trim63Q38HM4 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC12.78□□□□□ -0.36
Trim63Q38HM4 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC12.78□□□□□ -0.36
Trim63Q38HM4 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trim63Q38HM4 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trim63Q38HM4 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim63Q38HM4 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim63Q38HM4 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim63Q38HM4 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim63Q38HM4 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim63Q38HM4 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim63Q38HM4 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim63Q38HM4 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim63Q38HM4 Efs-202ENSMUST00000227037 2540 ntBASIC12.78□□□□□ -0.36
Trim63Q38HM4 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trim63Q38HM4 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trim63Q38HM4 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim63Q38HM4 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trim63Q38HM4 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim63Q38HM4 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Trim63Q38HM4 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim63Q38HM4 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.77□□□□□ -0.36
Trim63Q38HM4 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim63Q38HM4 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim63Q38HM4 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim63Q38HM4 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trim63Q38HM4 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim63Q38HM4 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC12.77□□□□□ -0.37
Trim63Q38HM4 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC12.77□□□□□ -0.37
Trim63Q38HM4 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim63Q38HM4 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim63Q38HM4 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim63Q38HM4 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trim63Q38HM4 Gm5812-201ENSMUST00000061073 957 ntBASIC12.77□□□□□ -0.37
Trim63Q38HM4 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim63Q38HM4 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim63Q38HM4 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim63Q38HM4 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim63Q38HM4 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim63Q38HM4 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim63Q38HM4 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim63Q38HM4 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim63Q38HM4 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim63Q38HM4 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim63Q38HM4 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim63Q38HM4 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trim63Q38HM4 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Trim63Q38HM4 CT010444.2-201ENSMUST00000217877 1629 ntBASIC12.77□□□□□ -0.37
Trim63Q38HM4 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim63Q38HM4 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim63Q38HM4 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim63Q38HM4 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim63Q38HM4 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim63Q38HM4 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim63Q38HM4 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim63Q38HM4 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim63Q38HM4 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim63Q38HM4 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms