Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx2-3P97334 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Nkx2-3P97334 Gm15693-201ENSMUST00000120470 637 ntBASIC19.34■□□□□ 0.69
Nkx2-3P97334 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC19.34■□□□□ 0.69
Nkx2-3P97334 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx2-3P97334 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx2-3P97334 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Nkx2-3P97334 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx2-3P97334 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx2-3P97334 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC19.34■□□□□ 0.69
Nkx2-3P97334 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx2-3P97334 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx2-3P97334 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx2-3P97334 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Nkx2-3P97334 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx2-3P97334 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Nkx2-3P97334 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nkx2-3P97334 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Nkx2-3P97334 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nkx2-3P97334 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC19.33■□□□□ 0.69
Nkx2-3P97334 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nkx2-3P97334 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nkx2-3P97334 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nkx2-3P97334 Dancr-204ENSMUST00000132389 2347 ntBASIC19.33■□□□□ 0.69
Nkx2-3P97334 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Nkx2-3P97334 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nkx2-3P97334 Gm2810-201ENSMUST00000118681 990 ntBASIC19.33■□□□□ 0.68
Nkx2-3P97334 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC19.33■□□□□ 0.68
Nkx2-3P97334 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Nkx2-3P97334 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Nkx2-3P97334 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nkx2-3P97334 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nkx2-3P97334 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Nkx2-3P97334 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nkx2-3P97334 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
Nkx2-3P97334 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nkx2-3P97334 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nkx2-3P97334 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC19.33■□□□□ 0.68
Nkx2-3P97334 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nkx2-3P97334 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nkx2-3P97334 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Nkx2-3P97334 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx2-3P97334 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx2-3P97334 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx2-3P97334 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Nkx2-3P97334 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Nkx2-3P97334 Gm12151-201ENSMUST00000121374 290 ntBASIC19.32■□□□□ 0.68
Nkx2-3P97334 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx2-3P97334 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC19.32■□□□□ 0.68
Nkx2-3P97334 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx2-3P97334 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx2-3P97334 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Nkx2-3P97334 Gm24158-201ENSMUST00000175263 71 ntBASIC19.32■□□□□ 0.68
Nkx2-3P97334 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx2-3P97334 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx2-3P97334 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx2-3P97334 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
Nkx2-3P97334 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx2-3P97334 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx2-3P97334 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Nkx2-3P97334 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx2-3P97334 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx2-3P97334 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx2-3P97334 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx2-3P97334 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Nkx2-3P97334 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Nkx2-3P97334 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Nkx2-3P97334 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC19.31■□□□□ 0.68
Nkx2-3P97334 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx2-3P97334 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx2-3P97334 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC19.31■□□□□ 0.68
Nkx2-3P97334 Gm5626-201ENSMUST00000222151 1058 ntBASIC19.31■□□□□ 0.68
Nkx2-3P97334 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC19.31■□□□□ 0.68
Nkx2-3P97334 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC19.31■□□□□ 0.68
Nkx2-3P97334 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx2-3P97334 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx2-3P97334 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx2-3P97334 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx2-3P97334 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx2-3P97334 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx2-3P97334 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx2-3P97334 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx2-3P97334 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx2-3P97334 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.31■□□□□ 0.68
Nkx2-3P97334 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC19.31■□□□□ 0.68
Nkx2-3P97334 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx2-3P97334 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx2-3P97334 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx2-3P97334 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx2-3P97334 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx2-3P97334 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx2-3P97334 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx2-3P97334 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx2-3P97334 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx2-3P97334 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Nkx2-3P97334 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Nkx2-3P97334 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx2-3P97334 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx2-3P97334 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC19.3■□□□□ 0.68
Nkx2-3P97334 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms