Protein–RNA interactions for Protein: P57748

Mmp20, Matrix metalloproteinase-20, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp20P57748 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp20P57748 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp20P57748 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp20P57748 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp20P57748 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Mmp20P57748 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp20P57748 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp20P57748 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp20P57748 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp20P57748 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp20P57748 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp20P57748 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp20P57748 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp20P57748 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp20P57748 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp20P57748 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp20P57748 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp20P57748 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp20P57748 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp20P57748 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp20P57748 Mir6977-201ENSMUST00000184960 64 ntBASIC17.62■□□□□ 0.41
Mmp20P57748 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp20P57748 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.62■□□□□ 0.41
Mmp20P57748 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp20P57748 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Mmp20P57748 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp20P57748 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp20P57748 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp20P57748 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp20P57748 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp20P57748 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp20P57748 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Mmp20P57748 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp20P57748 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp20P57748 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp20P57748 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp20P57748 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.61■□□□□ 0.41
Mmp20P57748 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.61■□□□□ 0.41
Mmp20P57748 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Mmp20P57748 Gm15693-201ENSMUST00000120470 637 ntBASIC17.61■□□□□ 0.41
Mmp20P57748 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC17.61■□□□□ 0.41
Mmp20P57748 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC17.61■□□□□ 0.41
Mmp20P57748 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Mmp20P57748 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp20P57748 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC17.61■□□□□ 0.41
Mmp20P57748 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC17.61■□□□□ 0.41
Mmp20P57748 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp20P57748 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Mmp20P57748 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp20P57748 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.61■□□□□ 0.41
Mmp20P57748 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Mmp20P57748 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp20P57748 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp20P57748 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp20P57748 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Mmp20P57748 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.6■□□□□ 0.41
Mmp20P57748 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp20P57748 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp20P57748 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp20P57748 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp20P57748 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp20P57748 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp20P57748 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.6■□□□□ 0.41
Mmp20P57748 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC17.6■□□□□ 0.41
Mmp20P57748 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC17.6■□□□□ 0.41
Mmp20P57748 Gm16026-204ENSMUST00000162652 683 ntBASIC17.6■□□□□ 0.41
Mmp20P57748 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Mmp20P57748 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC17.6■□□□□ 0.41
Mmp20P57748 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp20P57748 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp20P57748 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp20P57748 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp20P57748 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp20P57748 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Mmp20P57748 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp20P57748 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp20P57748 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Mmp20P57748 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp20P57748 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp20P57748 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp20P57748 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp20P57748 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp20P57748 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp20P57748 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Mmp20P57748 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp20P57748 Gm13223-201ENSMUST00000118609 747 ntBASIC17.59■□□□□ 0.41
Mmp20P57748 Gm2810-201ENSMUST00000118681 990 ntBASIC17.59■□□□□ 0.41
Mmp20P57748 Gm11543-201ENSMUST00000120758 370 ntBASIC17.59■□□□□ 0.41
Mmp20P57748 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Mmp20P57748 Gm18737-201ENSMUST00000173594 937 ntBASIC17.59■□□□□ 0.41
Mmp20P57748 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp20P57748 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp20P57748 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp20P57748 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.59■□□□□ 0.41
Mmp20P57748 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp20P57748 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp20P57748 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp20P57748 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp20P57748 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp20P57748 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms