Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfsf4P43488 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfsf4P43488 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfsf4P43488 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfsf4P43488 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.94□□□□□ -0.02
Tnfsf4P43488 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfsf4P43488 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfsf4P43488 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfsf4P43488 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfsf4P43488 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
Tnfsf4P43488 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfsf4P43488 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfsf4P43488 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfsf4P43488 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.93□□□□□ -0.02
Tnfsf4P43488 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.93□□□□□ -0.02
Tnfsf4P43488 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfsf4P43488 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.93□□□□□ -0.02
Tnfsf4P43488 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.93□□□□□ -0.02
Tnfsf4P43488 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.93□□□□□ -0.02
Tnfsf4P43488 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.93□□□□□ -0.02
Tnfsf4P43488 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.93□□□□□ -0.02
Tnfsf4P43488 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.93□□□□□ -0.02
Tnfsf4P43488 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.93□□□□□ -0.02
Tnfsf4P43488 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.93□□□□□ -0.02
Tnfsf4P43488 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.93□□□□□ -0.02
Tnfsf4P43488 Gm8825-201ENSMUST00000182565 998 ntBASIC14.93□□□□□ -0.02
Tnfsf4P43488 Gm4518-201ENSMUST00000182638 718 ntBASIC14.93□□□□□ -0.02
Tnfsf4P43488 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.93□□□□□ -0.02
Tnfsf4P43488 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.93□□□□□ -0.02
Tnfsf4P43488 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.93□□□□□ -0.02
Tnfsf4P43488 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
Tnfsf4P43488 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.93□□□□□ -0.02
Tnfsf4P43488 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfsf4P43488 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.93□□□□□ -0.02
Tnfsf4P43488 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.93□□□□□ -0.02
Tnfsf4P43488 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfsf4P43488 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfsf4P43488 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfsf4P43488 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfsf4P43488 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfsf4P43488 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfsf4P43488 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.93□□□□□ -0.02
Tnfsf4P43488 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfsf4P43488 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.92□□□□□ -0.02
Tnfsf4P43488 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfsf4P43488 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfsf4P43488 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfsf4P43488 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Tnfsf4P43488 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.92□□□□□ -0.02
Tnfsf4P43488 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.92□□□□□ -0.02
Tnfsf4P43488 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.92□□□□□ -0.02
Tnfsf4P43488 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.92□□□□□ -0.02
Tnfsf4P43488 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfsf4P43488 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Tnfsf4P43488 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfsf4P43488 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfsf4P43488 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfsf4P43488 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Tnfsf4P43488 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Tnfsf4P43488 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfsf4P43488 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.92□□□□□ -0.02
Tnfsf4P43488 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Tnfsf4P43488 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.92□□□□□ -0.02
Tnfsf4P43488 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfsf4P43488 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfsf4P43488 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfsf4P43488 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Tnfsf4P43488 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Tnfsf4P43488 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfsf4P43488 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfsf4P43488 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfsf4P43488 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfsf4P43488 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfsf4P43488 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfsf4P43488 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Tnfsf4P43488 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Tnfsf4P43488 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfsf4P43488 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfsf4P43488 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfsf4P43488 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfsf4P43488 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Tnfsf4P43488 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Tnfsf4P43488 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Tnfsf4P43488 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.91□□□□□ -0.02
Tnfsf4P43488 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.91□□□□□ -0.02
Tnfsf4P43488 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Tnfsf4P43488 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tnfsf4P43488 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Tnfsf4P43488 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.91□□□□□ -0.02
Tnfsf4P43488 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tnfsf4P43488 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.91□□□□□ -0.02
Tnfsf4P43488 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Tnfsf4P43488 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.91□□□□□ -0.02
Tnfsf4P43488 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tnfsf4P43488 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tnfsf4P43488 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tnfsf4P43488 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tnfsf4P43488 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Tnfsf4P43488 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tnfsf4P43488 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms