Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxc6P10629 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Hoxc6P10629 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Hoxc6P10629 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxc6P10629 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxc6P10629 Gm7901-201ENSMUST00000120430 1597 ntBASIC17.11■□□□□ 0.33
Hoxc6P10629 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxc6P10629 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Hoxc6P10629 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Hoxc6P10629 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Hoxc6P10629 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC17.11■□□□□ 0.33
Hoxc6P10629 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC17.11■□□□□ 0.33
Hoxc6P10629 Arhgef33-209ENSMUST00000225223 714 ntBASIC17.11■□□□□ 0.33
Hoxc6P10629 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxc6P10629 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Hoxc6P10629 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC17.11■□□□□ 0.33
Hoxc6P10629 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxc6P10629 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Hoxc6P10629 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxc6P10629 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxc6P10629 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxc6P10629 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxc6P10629 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.11■□□□□ 0.33
Hoxc6P10629 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxc6P10629 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxc6P10629 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxc6P10629 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.1■□□□□ 0.33
Hoxc6P10629 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxc6P10629 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxc6P10629 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxc6P10629 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxc6P10629 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxc6P10629 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Hoxc6P10629 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxc6P10629 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
Hoxc6P10629 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxc6P10629 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxc6P10629 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC17.1■□□□□ 0.33
Hoxc6P10629 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxc6P10629 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxc6P10629 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxc6P10629 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxc6P10629 CT025535.1-201ENSMUST00000227172 491 ntBASIC17.1■□□□□ 0.33
Hoxc6P10629 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxc6P10629 AC159621.2-201ENSMUST00000223519 1326 ntBASIC17.1■□□□□ 0.33
Hoxc6P10629 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Hoxc6P10629 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Hoxc6P10629 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxc6P10629 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Hoxc6P10629 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxc6P10629 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxc6P10629 Gm13337-201ENSMUST00000119183 1594 ntBASIC17.1■□□□□ 0.33
Hoxc6P10629 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxc6P10629 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxc6P10629 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxc6P10629 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Hoxc6P10629 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxc6P10629 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxc6P10629 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.09■□□□□ 0.33
Hoxc6P10629 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxc6P10629 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.09■□□□□ 0.33
Hoxc6P10629 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Hoxc6P10629 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.09■□□□□ 0.33
Hoxc6P10629 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.09■□□□□ 0.33
Hoxc6P10629 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxc6P10629 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxc6P10629 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxc6P10629 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxc6P10629 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Hoxc6P10629 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxc6P10629 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxc6P10629 Gm10499-201ENSMUST00000174094 934 ntBASIC17.09■□□□□ 0.33
Hoxc6P10629 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.09■□□□□ 0.33
Hoxc6P10629 Gm5626-201ENSMUST00000222151 1058 ntBASIC17.09■□□□□ 0.33
Hoxc6P10629 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxc6P10629 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxc6P10629 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxc6P10629 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxc6P10629 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxc6P10629 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.09■□□□□ 0.33
Hoxc6P10629 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.09■□□□□ 0.33
Hoxc6P10629 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxc6P10629 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Hoxc6P10629 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.09■□□□□ 0.33
Hoxc6P10629 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxc6P10629 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxc6P10629 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxc6P10629 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.08■□□□□ 0.33
Hoxc6P10629 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Hoxc6P10629 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hoxc6P10629 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
Hoxc6P10629 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Hoxc6P10629 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hoxc6P10629 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hoxc6P10629 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Hoxc6P10629 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hoxc6P10629 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hoxc6P10629 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxc6P10629 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Hoxc6P10629 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms