Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Gm29707-201ENSMUST00000196325 491 ntBASIC14.66□□□□□ -0.06
Krt1P04104 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Krt1P04104 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.66□□□□□ -0.06
Krt1P04104 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Krt1P04104 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Krt1P04104 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Krt1P04104 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Krt1P04104 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Krt1P04104 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Krt1P04104 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Krt1P04104 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Krt1P04104 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.66□□□□□ -0.06
Krt1P04104 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Krt1P04104 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Krt1P04104 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Krt1P04104 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Krt1P04104 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Krt1P04104 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.65□□□□□ -0.06
Krt1P04104 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.65□□□□□ -0.06
Krt1P04104 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
Krt1P04104 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Krt1P04104 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Krt1P04104 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Krt1P04104 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Krt1P04104 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC14.65□□□□□ -0.06
Krt1P04104 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Krt1P04104 Gm27275-201ENSMUST00000184318 272 ntBASIC14.65□□□□□ -0.06
Krt1P04104 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Krt1P04104 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Krt1P04104 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC14.65□□□□□ -0.06
Krt1P04104 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Krt1P04104 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Krt1P04104 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.65□□□□□ -0.06
Krt1P04104 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Krt1P04104 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Krt1P04104 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Krt1P04104 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
Krt1P04104 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Krt1P04104 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Krt1P04104 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Krt1P04104 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Krt1P04104 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.65□□□□□ -0.06
Krt1P04104 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Krt1P04104 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Krt1P04104 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Krt1P04104 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Krt1P04104 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.64□□□□□ -0.07
Krt1P04104 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Krt1P04104 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.64□□□□□ -0.07
Krt1P04104 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Krt1P04104 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Krt1P04104 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Krt1P04104 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Krt1P04104 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Krt1P04104 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Krt1P04104 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Krt1P04104 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.64□□□□□ -0.07
Krt1P04104 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Krt1P04104 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.64□□□□□ -0.07
Krt1P04104 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Krt1P04104 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Krt1P04104 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.64□□□□□ -0.07
Krt1P04104 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Krt1P04104 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Krt1P04104 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Krt1P04104 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Krt1P04104 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Krt1P04104 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Krt1P04104 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Krt1P04104 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Krt1P04104 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Krt1P04104 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Krt1P04104 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.64□□□□□ -0.07
Krt1P04104 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Krt1P04104 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Krt1P04104 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Krt1P04104 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Krt1P04104 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Krt1P04104 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Krt1P04104 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Krt1P04104 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Krt1P04104 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Krt1P04104 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Krt1P04104 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Krt1P04104 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Krt1P04104 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Krt1P04104 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Krt1P04104 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Krt1P04104 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Krt1P04104 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Krt1P04104 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Krt1P04104 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC14.63□□□□□ -0.07
Krt1P04104 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Krt1P04104 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Krt1P04104 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Krt1P04104 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Krt1P04104 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Krt1P04104 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Krt1P04104 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.63□□□□□ -0.07
Krt1P04104 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms