Protein–RNA interactions for Protein: O08788

Dctn1, Dynactin subunit 1, mousemouse

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dctn1O08788 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Dctn1O08788 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
Dctn1O08788 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC19.01■□□□□ 0.63
Dctn1O08788 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Dctn1O08788 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC19.01■□□□□ 0.63
Dctn1O08788 Nudt18-203ENSMUST00000228768 1578 ntBASIC19.01■□□□□ 0.63
Dctn1O08788 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Dctn1O08788 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Dctn1O08788 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Dctn1O08788 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Dctn1O08788 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Dctn1O08788 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Dctn1O08788 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Dctn1O08788 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Dctn1O08788 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Dctn1O08788 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Dctn1O08788 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Dctn1O08788 Mir449b-201ENSMUST00000104833 80 ntBASIC19■□□□□ 0.63
Dctn1O08788 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC19■□□□□ 0.63
Dctn1O08788 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC19■□□□□ 0.63
Dctn1O08788 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC19■□□□□ 0.63
Dctn1O08788 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Dctn1O08788 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Dctn1O08788 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Dctn1O08788 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC19■□□□□ 0.63
Dctn1O08788 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC19■□□□□ 0.63
Dctn1O08788 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Dctn1O08788 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19■□□□□ 0.63
Dctn1O08788 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Dctn1O08788 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Dctn1O08788 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC19■□□□□ 0.63
Dctn1O08788 Gm6018-201ENSMUST00000216090 1306 ntBASIC19■□□□□ 0.63
Dctn1O08788 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Dctn1O08788 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Dctn1O08788 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Dctn1O08788 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Dctn1O08788 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Dctn1O08788 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC18.99■□□□□ 0.63
Dctn1O08788 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Dctn1O08788 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Dctn1O08788 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC18.99■□□□□ 0.63
Dctn1O08788 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Dctn1O08788 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Dctn1O08788 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Dctn1O08788 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC18.99■□□□□ 0.63
Dctn1O08788 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Dctn1O08788 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Dctn1O08788 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Dctn1O08788 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Dctn1O08788 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Dctn1O08788 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Dctn1O08788 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Dctn1O08788 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Dctn1O08788 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Dctn1O08788 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC18.99■□□□□ 0.63
Dctn1O08788 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Dctn1O08788 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Dctn1O08788 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Dctn1O08788 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Dctn1O08788 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Dctn1O08788 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC18.98■□□□□ 0.63
Dctn1O08788 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Dctn1O08788 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Dctn1O08788 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Dctn1O08788 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Dctn1O08788 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Dctn1O08788 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Dctn1O08788 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC18.98■□□□□ 0.63
Dctn1O08788 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC18.98■□□□□ 0.63
Dctn1O08788 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC18.98■□□□□ 0.63
Dctn1O08788 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Dctn1O08788 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Dctn1O08788 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Dctn1O08788 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Dctn1O08788 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Dctn1O08788 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.98■□□□□ 0.63
Dctn1O08788 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Dctn1O08788 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Dctn1O08788 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Dctn1O08788 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Dctn1O08788 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Dctn1O08788 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
Dctn1O08788 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Dctn1O08788 Gm22175-201ENSMUST00000175007 78 ntBASIC18.97■□□□□ 0.63
Dctn1O08788 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC18.97■□□□□ 0.63
Dctn1O08788 Gm18057-201ENSMUST00000208220 503 ntBASIC18.97■□□□□ 0.63
Dctn1O08788 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC18.97■□□□□ 0.63
Dctn1O08788 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Dctn1O08788 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Dctn1O08788 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Dctn1O08788 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Dctn1O08788 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Dctn1O08788 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Dctn1O08788 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Dctn1O08788 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Dctn1O08788 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Dctn1O08788 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Dctn1O08788 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC18.96■□□□□ 0.63
Dctn1O08788 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Dctn1O08788 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms