Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3727J3QM54 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3727J3QM54 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3727J3QM54 Gm7712-202ENSMUST00000222331 1510 ntBASIC13.17□□□□□ -0.3
Gm3727J3QM54 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3727J3QM54 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3727J3QM54 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3727J3QM54 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3727J3QM54 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3727J3QM54 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3727J3QM54 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Gm3727J3QM54 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Gm3727J3QM54 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3727J3QM54 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3727J3QM54 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.16□□□□□ -0.3
Gm3727J3QM54 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Gm3727J3QM54 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3727J3QM54 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Gm3727J3QM54 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.16□□□□□ -0.3
Gm3727J3QM54 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Gm3727J3QM54 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3727J3QM54 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3727J3QM54 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Gm3727J3QM54 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3727J3QM54 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3727J3QM54 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3727J3QM54 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3727J3QM54 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3727J3QM54 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3727J3QM54 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Gm3727J3QM54 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Gm3727J3QM54 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Gm3727J3QM54 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3727J3QM54 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Gm3727J3QM54 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3727J3QM54 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.16□□□□□ -0.3
Gm3727J3QM54 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3727J3QM54 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3727J3QM54 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3727J3QM54 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3727J3QM54 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3727J3QM54 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3727J3QM54 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3727J3QM54 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Gm3727J3QM54 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3727J3QM54 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3727J3QM54 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Gm3727J3QM54 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3727J3QM54 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Gm3727J3QM54 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm3727J3QM54 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm3727J3QM54 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm3727J3QM54 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm3727J3QM54 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Gm3727J3QM54 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.15□□□□□ -0.3
Gm3727J3QM54 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Gm3727J3QM54 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Gm3727J3QM54 Gm12933-201ENSMUST00000120203 872 ntBASIC13.15□□□□□ -0.3
Gm3727J3QM54 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Gm3727J3QM54 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.15□□□□□ -0.3
Gm3727J3QM54 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm3727J3QM54 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.15□□□□□ -0.3
Gm3727J3QM54 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm3727J3QM54 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm3727J3QM54 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm3727J3QM54 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm3727J3QM54 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Gm3727J3QM54 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Gm3727J3QM54 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm3727J3QM54 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm3727J3QM54 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm3727J3QM54 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm3727J3QM54 AC132265.1-201ENSMUST00000219233 1665 ntBASIC13.15□□□□□ -0.31
Gm3727J3QM54 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Gm3727J3QM54 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm3727J3QM54 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Gm3727J3QM54 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Gm3727J3QM54 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm3727J3QM54 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm3727J3QM54 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Gm3727J3QM54 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm3727J3QM54 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm3727J3QM54 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm3727J3QM54 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Gm3727J3QM54 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm3727J3QM54 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm3727J3QM54 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Gm3727J3QM54 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm3727J3QM54 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm3727J3QM54 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Gm3727J3QM54 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Gm3727J3QM54 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm3727J3QM54 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm3727J3QM54 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm3727J3QM54 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Gm3727J3QM54 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC13.14□□□□□ -0.31
Gm3727J3QM54 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm3727J3QM54 Gm29707-201ENSMUST00000196325 491 ntBASIC13.14□□□□□ -0.31
Gm3727J3QM54 Gm44878-201ENSMUST00000205812 1295 ntBASIC13.14□□□□□ -0.31
Gm3727J3QM54 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms