Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav12-1A0N8R1 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.91□□□□□ -0.34
Trav12-1A0N8R1 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12-1A0N8R1 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12-1A0N8R1 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12-1A0N8R1 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12-1A0N8R1 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12-1A0N8R1 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.91□□□□□ -0.34
Trav12-1A0N8R1 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12-1A0N8R1 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12-1A0N8R1 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.91□□□□□ -0.34
Trav12-1A0N8R1 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12-1A0N8R1 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Trav12-1A0N8R1 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav12-1A0N8R1 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav12-1A0N8R1 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.91□□□□□ -0.34
Trav12-1A0N8R1 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.91□□□□□ -0.34
Trav12-1A0N8R1 Gm10252-201ENSMUST00000209541 832 ntBASIC12.91□□□□□ -0.34
Trav12-1A0N8R1 Gm9172-201ENSMUST00000212092 954 ntBASIC12.91□□□□□ -0.34
Trav12-1A0N8R1 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12-1A0N8R1 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav12-1A0N8R1 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12-1A0N8R1 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.91□□□□□ -0.34
Trav12-1A0N8R1 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12-1A0N8R1 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12-1A0N8R1 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12-1A0N8R1 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Trav12-1A0N8R1 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12-1A0N8R1 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trav12-1A0N8R1 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12-1A0N8R1 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12-1A0N8R1 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav12-1A0N8R1 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12-1A0N8R1 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12-1A0N8R1 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12-1A0N8R1 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12-1A0N8R1 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12-1A0N8R1 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12-1A0N8R1 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav12-1A0N8R1 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12-1A0N8R1 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12-1A0N8R1 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12-1A0N8R1 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav12-1A0N8R1 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav12-1A0N8R1 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
Trav12-1A0N8R1 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trav12-1A0N8R1 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav12-1A0N8R1 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav12-1A0N8R1 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav12-1A0N8R1 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav12-1A0N8R1 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav12-1A0N8R1 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav12-1A0N8R1 Gm25016-201ENSMUST00000158399 131 ntBASIC12.9□□□□□ -0.34
Trav12-1A0N8R1 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trav12-1A0N8R1 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
Trav12-1A0N8R1 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav12-1A0N8R1 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav12-1A0N8R1 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav12-1A0N8R1 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav12-1A0N8R1 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Trav12-1A0N8R1 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trav12-1A0N8R1 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
Trav12-1A0N8R1 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav12-1A0N8R1 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav12-1A0N8R1 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
Trav12-1A0N8R1 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.9□□□□□ -0.35
Trav12-1A0N8R1 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav12-1A0N8R1 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav12-1A0N8R1 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav12-1A0N8R1 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.35
Trav12-1A0N8R1 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav12-1A0N8R1 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav12-1A0N8R1 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav12-1A0N8R1 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav12-1A0N8R1 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trav12-1A0N8R1 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.89□□□□□ -0.35
Trav12-1A0N8R1 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav12-1A0N8R1 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav12-1A0N8R1 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav12-1A0N8R1 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav12-1A0N8R1 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Trav12-1A0N8R1 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Trav12-1A0N8R1 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trav12-1A0N8R1 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav12-1A0N8R1 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav12-1A0N8R1 Rprl3-201ENSMUST00000157400 290 ntBASIC12.89□□□□□ -0.35
Trav12-1A0N8R1 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav12-1A0N8R1 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Trav12-1A0N8R1 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav12-1A0N8R1 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.89□□□□□ -0.35
Trav12-1A0N8R1 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav12-1A0N8R1 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav12-1A0N8R1 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav12-1A0N8R1 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav12-1A0N8R1 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav12-1A0N8R1 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav12-1A0N8R1 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav12-1A0N8R1 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms